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The Effect of Tethers on Artificial Cell Membranes: A Coarse-Grained Molecular Dynamics Study

Tethered bilayer lipid membranes (tBLMs) provide a stable platform for modeling the dynamics and order of biological membranes where the tethers mimic the cytoskeletal supports present in biological cell membranes. In this paper coarse-grained molecular dynamics (CGMD) is applied to study the effect...

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Autores principales: Hoiles, William, Gupta, Rini, Cornell, Bruce, Cranfield, Charles, Krishnamurthy, Vikram
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5063460/
https://www.ncbi.nlm.nih.gov/pubmed/27736860
http://dx.doi.org/10.1371/journal.pone.0162790
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author Hoiles, William
Gupta, Rini
Cornell, Bruce
Cranfield, Charles
Krishnamurthy, Vikram
author_facet Hoiles, William
Gupta, Rini
Cornell, Bruce
Cranfield, Charles
Krishnamurthy, Vikram
author_sort Hoiles, William
collection PubMed
description Tethered bilayer lipid membranes (tBLMs) provide a stable platform for modeling the dynamics and order of biological membranes where the tethers mimic the cytoskeletal supports present in biological cell membranes. In this paper coarse-grained molecular dynamics (CGMD) is applied to study the effects of tethers on lipid membrane properties. Using results from the CGMD model and the overdamped Fokker-Planck equation, we show that the diffusion tensor and particle density of water in the tBLM is spatially dependent. Further, it is shown that the membrane thickness, lipid diffusion, defect density, free energy of lipid flip-flop, and membrane dielectric permittivity are all dependent on the tether density. The numerically computed results from the CGMD model are in agreement with the experimentally measured results from tBLMs containing different tether densities and lipids derived from Archaebacteria. Additionally, using experimental measurements from Escherichia coli bacteria and Saccharomyces Cerevisiae yeast tethered membranes, we illustrate how previous molecular dynamics results can be combined with the proposed model to estimate the dielectric permittivity and defect density of these membranes as a function of tether density.
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spelling pubmed-50634602016-11-04 The Effect of Tethers on Artificial Cell Membranes: A Coarse-Grained Molecular Dynamics Study Hoiles, William Gupta, Rini Cornell, Bruce Cranfield, Charles Krishnamurthy, Vikram PLoS One Research Article Tethered bilayer lipid membranes (tBLMs) provide a stable platform for modeling the dynamics and order of biological membranes where the tethers mimic the cytoskeletal supports present in biological cell membranes. In this paper coarse-grained molecular dynamics (CGMD) is applied to study the effects of tethers on lipid membrane properties. Using results from the CGMD model and the overdamped Fokker-Planck equation, we show that the diffusion tensor and particle density of water in the tBLM is spatially dependent. Further, it is shown that the membrane thickness, lipid diffusion, defect density, free energy of lipid flip-flop, and membrane dielectric permittivity are all dependent on the tether density. The numerically computed results from the CGMD model are in agreement with the experimentally measured results from tBLMs containing different tether densities and lipids derived from Archaebacteria. Additionally, using experimental measurements from Escherichia coli bacteria and Saccharomyces Cerevisiae yeast tethered membranes, we illustrate how previous molecular dynamics results can be combined with the proposed model to estimate the dielectric permittivity and defect density of these membranes as a function of tether density. Public Library of Science 2016-10-13 /pmc/articles/PMC5063460/ /pubmed/27736860 http://dx.doi.org/10.1371/journal.pone.0162790 Text en © 2016 Hoiles et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Hoiles, William
Gupta, Rini
Cornell, Bruce
Cranfield, Charles
Krishnamurthy, Vikram
The Effect of Tethers on Artificial Cell Membranes: A Coarse-Grained Molecular Dynamics Study
title The Effect of Tethers on Artificial Cell Membranes: A Coarse-Grained Molecular Dynamics Study
title_full The Effect of Tethers on Artificial Cell Membranes: A Coarse-Grained Molecular Dynamics Study
title_fullStr The Effect of Tethers on Artificial Cell Membranes: A Coarse-Grained Molecular Dynamics Study
title_full_unstemmed The Effect of Tethers on Artificial Cell Membranes: A Coarse-Grained Molecular Dynamics Study
title_short The Effect of Tethers on Artificial Cell Membranes: A Coarse-Grained Molecular Dynamics Study
title_sort effect of tethers on artificial cell membranes: a coarse-grained molecular dynamics study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5063460/
https://www.ncbi.nlm.nih.gov/pubmed/27736860
http://dx.doi.org/10.1371/journal.pone.0162790
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