Cargando…

Species-Level Para- and Polyphyly in DNA Barcode Gene Trees: Strong Operational Bias in European Lepidoptera

The proliferation of DNA data is revolutionizing all fields of systematic research. DNA barcode sequences, now available for millions of specimens and several hundred thousand species, are increasingly used in algorithmic species delimitations. This is complicated by occasional incongruences between...

Descripción completa

Detalles Bibliográficos
Autores principales:	Mutanen, Marko, Kivelä, Sami M., Vos, Rutger A., Doorenweerd, Camiel, Ratnasingham, Sujeevan, Hausmann, Axel, Huemer, Peter, Dincă, Vlad, van Nieukerken, Erik J., Lopez-Vaamonde, Carlos, Vila, Roger, Aarvik, Leif, Decaëns, Thibaud, Efetov, Konstantin A., Hebert, Paul D. N., Johnsen, Arild, Karsholt, Ole, Pentinsaari, Mikko, Rougerie, Rodolphe, Segerer, Andreas, Tarmann, Gerhard, Zahiri, Reza, Godfray, H. Charles J.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2016
Materias:	Regular Articles
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5066064/ https://www.ncbi.nlm.nih.gov/pubmed/27288478 http://dx.doi.org/10.1093/sysbio/syw044

Ejemplares similares

Genetic Patterns in European Geometrid Moths Revealed by the Barcode Index Number (BIN) System
por: Hausmann, Axel, et al.
Publicado: (2013)

Correction: Genetic Patterns in European Geometrid Moths Revealed by the Barcode Index Number (BIN) System
por: Hausmann, Axel, et al.
Publicado: (2013)

DNA barcoding as a screening tool for cryptic diversity: an example from Caryocolum, with description of a new species (Lepidoptera, Gelechiidae)
por: Huemer, Peter, et al.
Publicado: (2014)

DNA barcode library for European Gelechiidae (Lepidoptera) suggests greatly underestimated species diversity
por: Huemer, Peter, et al.
Publicado: (2020)

BOLD and GenBank revisited – Do identification errors arise in the lab or in the sequence libraries?
por: Pentinsaari, Mikko, et al.
Publicado: (2020)

Integrative taxonomy reveals a new species of Callisto (Lepidoptera, Gracillariidae) in the Alps
por: Kirichenko, Natalia, et al.
Publicado: (2015)

A Global Phylogeny of Leafmining Ectoedemia Moths (Lepidoptera: Nepticulidae): Exploring Host Plant Family Shifts and Allopatry as Drivers of Speciation
por: Doorenweerd, Camiel, et al.
Publicado: (2015)

New taxa, including three new genera show uniqueness of Neotropical Nepticulidae (Lepidoptera)
por: van Nieukerken, Erik J., et al.
Publicado: (2016)

Monopis jussii, a new species (Lepidoptera, Tineidae) inhabiting nests of the Boreal owl (Aegolius funereus)
por: Mutanen, Marko, et al.
Publicado: (2020)

Integrative taxonomy reveals overlooked cryptic diversity in the conifer feeding Batrachedrapinicolella (Zeller, 1839) (Lepidoptera, Batrachedridae)
por: Berggren, Kai, et al.
Publicado: (2022)

Revised classification and catalogue of global Nepticulidae and Opostegidae (Lepidoptera, Nepticuloidea)
por: van Nieukerken, Erik J., et al.
Publicado: (2016)

A Linnaeus NG (TM) interactive key to the Lithocolletinae of North-West Europe aimed at accelerating the accumulation of reliable biodiversity data (Lepidoptera, Gracillariidae)
por: Doorenweerd, Camiel, et al.
Publicado: (2014)

Phylogenetic position of the ‘extinct’ Fijian coconut moth, Levuana iridescens (Lepidoptera: Zygaenidae)
por: Nazari, Vazrick, et al.
Publicado: (2019)

Description of three new species of Automeris Hübner, 1819 from Colombia and Brazil (Lepidoptera, Saturniidae, Hemileucinae)
por: Decaëns, Thibaud, et al.
Publicado: (2021)

Out of Xanthopygus (Coleoptera: Staphylinidae): escape from polyphyly
por: Chatzimanolis, Stylianos
Publicado: (2021)

Antispila oinophylla new species (Lepidoptera, Heliozelidae), a new North American grapevine leafminer invading Italian vineyards: taxonomy, DNA barcodes and life cycle
por: van Nieukerken, Erik J., et al.
Publicado: (2012)

Revision of the genus Megacraspedus Zeller, 1839, a challenging taxonomic tightrope of species delimitation (Lepidoptera, Gelechiidae)
por: Huemer, Peter, et al.
Publicado: (2018)

Commented checklist of European Gelechiidae (Lepidoptera)
por: Huemer, Peter, et al.
Publicado: (2020)

DNA Barcoding Reveals Cryptic Diversity in Lumbricus terrestris L., 1758 (Clitellata): Resurrection of L. herculeus (Savigny, 1826)
por: James, Samuel W., et al.
Publicado: (2010)

Polyphyly and gene flow between non-sibling Heliconius species
por: Bull, Vanessa, et al.
Publicado: (2006)

Stripe smuts of grasses: one lineage or high levels of polyphyly?
por: Savchenko, K.G., et al.
Publicado: (2014)

Polyphyly of Lichen-cryptic Dagger Moths: synonymy of Agriopodes Hampson and description of a new basal acronictine genus, Chloronycta, gen. n. (Lepidoptera, Noctuidae)
por: Schmidt, B. Christian, et al.
Publicado: (2014)

bold: The Barcode of Life Data System (http://www.barcodinglife.org)
por: RATNASINGHAM, SUJEEVAN, et al.
Publicado: (2007)

A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System
por: Ratnasingham, Sujeevan, et al.
Publicado: (2013)

Barcoding Beetles: A Regional Survey of 1872 Species Reveals High Identification Success and Unusually Deep Interspecific Divergences
por: Pentinsaari, Mikko, et al.
Publicado: (2014)

Molecular evolution of a widely-adopted taxonomic marker (COI) across the animal tree of life
por: Pentinsaari, Mikko, et al.
Publicado: (2016)

Megacraspedus cottiensis sp. nov. (Lepidoptera, Gelechiidae) from northern Italy – a case of taxonomic confusion
por: Huemer, Peter, et al.
Publicado: (2020)

Symbiont polyphyly, co-evolution, and necessity in pentatomid stinkbugs from Costa Rica
por: Bistolas, Kalia S. I., et al.
Publicado: (2014)

Molecular Phylogeny of Sequenced Saccharomycetes Reveals Polyphyly of the Alternative Yeast Codon Usage
por: Mühlhausen, Stefanie, et al.
Publicado: (2014)

Thiotrichasumpichi sp. nov. – a new species of Thiotrichinae (Lepidoptera, Gelechiidae) from south-eastern Europe
por: Bidzilya, Oleksiy V., et al.
Publicado: (2023)

Retracted: Molecular Phylogeny of Sequenced Saccharomycetes Reveals Polyphyly of the Alternative Yeast Codon Usage
por: Mühlhausen, Stefanie, et al.
Publicado: (2014)

Polyphyly of the extinct family Oviparosiphidae and its implications for inferring aphid evolution (Hemiptera, Sternorrhyncha)
por: Żyła, Dagmara, et al.
Publicado: (2017)

Comparative mitogenomic analyses and gene rearrangements reject the alleged polyphyly of a bivalve genus
por: Cunha, Regina L., et al.
Publicado: (2022)

The Dacini fruit fly fauna of Sulawesi fits Lydekker’s line but also supports Wallacea as a biogeographic region (Diptera, Tephritidae)
por: Doorenweerd, Camiel, et al.
Publicado: (2020)

Novel lures and COI sequences reveal cryptic new species of Bactrocera fruit flies in the Solomon Islands (Diptera, Tephritidae, Dacini)
por: Leblanc, Luc, et al.
Publicado: (2021)

Systematics of Phyllocnistis leaf-mining moths (Lepidoptera, Gracillariidae) feeding on dogwood (Cornus spp.) in Northeast Asia, with the description of three new species
por: Kirichenko, Natalia, et al.
Publicado: (2018)

Hawaiian Philodoria (Lepidoptera, Gracillariidae, Ornixolinae) leaf mining moths on Myrsine (Primulaceae): two new species and biological data
por: Kobayashi, Shigeki, et al.
Publicado: (2018)

Alpha taxonomy of the genus Kessleria Nowicki, 1864, revisited in light of DNA-barcoding (Lepidoptera, Yponomeutidae)
por: Huemer, Peter, et al.
Publicado: (2015)

Evidence for Polyphyly of the Genus Scrupocellaria (Bryozoa: Candidae) Based on a Phylogenetic Analysis of Morphological Characters
por: Vieira, Leandro M., et al.
Publicado: (2014)

Polyphyly in 16S rRNA-based LVTree Versus Monophyly in Whole-genome-based CVTree
por: Zuo, Guanghong, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_4dkd228lmk8tn1lh0o9a61707p