Cargando…
VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014
VIRO-TypeNed is a collaborative molecular surveillance platform facilitated through a web-based database. Genetic data in combination with epidemiological, clinical and patient data are shared between clinical and public health laboratories, as part of the surveillance underpinning poliovirus eradic...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
European Centre for Disease Prevention and Control (ECDC)
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5069426/ https://www.ncbi.nlm.nih.gov/pubmed/27719752 http://dx.doi.org/10.2807/1560-7917.ES.2016.21.39.30352 |
_version_ | 1782460935007371264 |
---|---|
author | Benschop, Kimberley S M Rahamat-Langendoen, Janette C van der Avoort, Harrie G A M Claas, Eric C J Pas, Suzan D Schuurman, Rob Verweij, Jaco J Wolthers, Katja C Niesters, Hubert G M Koopmans, Marion P G |
author_facet | Benschop, Kimberley S M Rahamat-Langendoen, Janette C van der Avoort, Harrie G A M Claas, Eric C J Pas, Suzan D Schuurman, Rob Verweij, Jaco J Wolthers, Katja C Niesters, Hubert G M Koopmans, Marion P G |
author_sort | Benschop, Kimberley S M |
collection | PubMed |
description | VIRO-TypeNed is a collaborative molecular surveillance platform facilitated through a web-based database. Genetic data in combination with epidemiological, clinical and patient data are shared between clinical and public health laboratories, as part of the surveillance underpinning poliovirus eradication. We analysed the combination of data submitted from 2010 to 2014 to understand circulation patterns of non-polio enteroviruses (NPEV) of public health relevance. Two epidemiological patterns were observed based on VIRO-TypeNed data and classical surveillance data dating back to 1996: (i) endemic cyclic, characterised by predictable upsurges/outbreaks every two to four years, and (ii) epidemic, where rare virus types caused upsurges/outbreaks. Genetic analysis suggests continuous temporal displacement of virus lineages due to the accumulation of (silent) genetic changes. Non-synonymous changes in the antigenic B/C loop suggest antigenic diversification, which may affect population susceptibility. Infections were frequently detected at an age under three months and at an older, parenting age (25–49 years) pointing to a distinct role of immunity in the circulation patterns. Upsurges were detected in the summer and winter which can promote increased transmissibility underlying new (cyclic) upsurges and requires close monitoring. The combination of data provide a better understanding of NPEV circulation required to control and curtail upsurges and outbreaks. |
format | Online Article Text |
id | pubmed-5069426 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | European Centre for Disease Prevention and Control (ECDC) |
record_format | MEDLINE/PubMed |
spelling | pubmed-50694262016-10-21 VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014 Benschop, Kimberley S M Rahamat-Langendoen, Janette C van der Avoort, Harrie G A M Claas, Eric C J Pas, Suzan D Schuurman, Rob Verweij, Jaco J Wolthers, Katja C Niesters, Hubert G M Koopmans, Marion P G Euro Surveill Surveillance and Outbreak Report VIRO-TypeNed is a collaborative molecular surveillance platform facilitated through a web-based database. Genetic data in combination with epidemiological, clinical and patient data are shared between clinical and public health laboratories, as part of the surveillance underpinning poliovirus eradication. We analysed the combination of data submitted from 2010 to 2014 to understand circulation patterns of non-polio enteroviruses (NPEV) of public health relevance. Two epidemiological patterns were observed based on VIRO-TypeNed data and classical surveillance data dating back to 1996: (i) endemic cyclic, characterised by predictable upsurges/outbreaks every two to four years, and (ii) epidemic, where rare virus types caused upsurges/outbreaks. Genetic analysis suggests continuous temporal displacement of virus lineages due to the accumulation of (silent) genetic changes. Non-synonymous changes in the antigenic B/C loop suggest antigenic diversification, which may affect population susceptibility. Infections were frequently detected at an age under three months and at an older, parenting age (25–49 years) pointing to a distinct role of immunity in the circulation patterns. Upsurges were detected in the summer and winter which can promote increased transmissibility underlying new (cyclic) upsurges and requires close monitoring. The combination of data provide a better understanding of NPEV circulation required to control and curtail upsurges and outbreaks. European Centre for Disease Prevention and Control (ECDC) 2016-09-29 /pmc/articles/PMC5069426/ /pubmed/27719752 http://dx.doi.org/10.2807/1560-7917.ES.2016.21.39.30352 Text en This article is copyright of The Authors, 2016. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY 4.0) Licence. You may share and adapt the material, but must give appropriate credit to the source, provide a link to the licence, and indicate if changes were made. |
spellingShingle | Surveillance and Outbreak Report Benschop, Kimberley S M Rahamat-Langendoen, Janette C van der Avoort, Harrie G A M Claas, Eric C J Pas, Suzan D Schuurman, Rob Verweij, Jaco J Wolthers, Katja C Niesters, Hubert G M Koopmans, Marion P G VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014 |
title | VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014 |
title_full | VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014 |
title_fullStr | VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014 |
title_full_unstemmed | VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014 |
title_short | VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014 |
title_sort | viro-typened, systematic molecular surveillance of enteroviruses in the netherlands between 2010 and 2014 |
topic | Surveillance and Outbreak Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5069426/ https://www.ncbi.nlm.nih.gov/pubmed/27719752 http://dx.doi.org/10.2807/1560-7917.ES.2016.21.39.30352 |
work_keys_str_mv | AT benschopkimberleysm virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT rahamatlangendoenjanettec virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT vanderavoortharriegam virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT claasericcj virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT passuzand virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT schuurmanrob virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT verweijjacoj virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT woltherskatjac virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT niestershubertgm virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT koopmansmarionpg virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 AT virotypenedsystematicmolecularsurveillanceofenterovirusesinthenetherlandsbetween2010and2014 |