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VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014

VIRO-TypeNed is a collaborative molecular surveillance platform facilitated through a web-based database. Genetic data in combination with epidemiological, clinical and patient data are shared between clinical and public health laboratories, as part of the surveillance underpinning poliovirus eradic...

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Autores principales: Benschop, Kimberley S M, Rahamat-Langendoen, Janette C, van der Avoort, Harrie G A M, Claas, Eric C J, Pas, Suzan D, Schuurman, Rob, Verweij, Jaco J, Wolthers, Katja C, Niesters, Hubert G M, Koopmans, Marion P G
Formato: Online Artículo Texto
Lenguaje:English
Publicado: European Centre for Disease Prevention and Control (ECDC) 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5069426/
https://www.ncbi.nlm.nih.gov/pubmed/27719752
http://dx.doi.org/10.2807/1560-7917.ES.2016.21.39.30352
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author Benschop, Kimberley S M
Rahamat-Langendoen, Janette C
van der Avoort, Harrie G A M
Claas, Eric C J
Pas, Suzan D
Schuurman, Rob
Verweij, Jaco J
Wolthers, Katja C
Niesters, Hubert G M
Koopmans, Marion P G
author_facet Benschop, Kimberley S M
Rahamat-Langendoen, Janette C
van der Avoort, Harrie G A M
Claas, Eric C J
Pas, Suzan D
Schuurman, Rob
Verweij, Jaco J
Wolthers, Katja C
Niesters, Hubert G M
Koopmans, Marion P G
author_sort Benschop, Kimberley S M
collection PubMed
description VIRO-TypeNed is a collaborative molecular surveillance platform facilitated through a web-based database. Genetic data in combination with epidemiological, clinical and patient data are shared between clinical and public health laboratories, as part of the surveillance underpinning poliovirus eradication. We analysed the combination of data submitted from 2010 to 2014 to understand circulation patterns of non-polio enteroviruses (NPEV) of public health relevance. Two epidemiological patterns were observed based on VIRO-TypeNed data and classical surveillance data dating back to 1996: (i) endemic cyclic, characterised by predictable upsurges/outbreaks every two to four years, and (ii) epidemic, where rare virus types caused upsurges/outbreaks. Genetic analysis suggests continuous temporal displacement of virus lineages due to the accumulation of (silent) genetic changes. Non-synonymous changes in the antigenic B/C loop suggest antigenic diversification, which may affect population susceptibility. Infections were frequently detected at an age under three months and at an older, parenting age (25–49 years) pointing to a distinct role of immunity in the circulation patterns. Upsurges were detected in the summer and winter which can promote increased transmissibility underlying new (cyclic) upsurges and requires close monitoring. The combination of data provide a better understanding of NPEV circulation required to control and curtail upsurges and outbreaks.
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spelling pubmed-50694262016-10-21 VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014 Benschop, Kimberley S M Rahamat-Langendoen, Janette C van der Avoort, Harrie G A M Claas, Eric C J Pas, Suzan D Schuurman, Rob Verweij, Jaco J Wolthers, Katja C Niesters, Hubert G M Koopmans, Marion P G Euro Surveill Surveillance and Outbreak Report VIRO-TypeNed is a collaborative molecular surveillance platform facilitated through a web-based database. Genetic data in combination with epidemiological, clinical and patient data are shared between clinical and public health laboratories, as part of the surveillance underpinning poliovirus eradication. We analysed the combination of data submitted from 2010 to 2014 to understand circulation patterns of non-polio enteroviruses (NPEV) of public health relevance. Two epidemiological patterns were observed based on VIRO-TypeNed data and classical surveillance data dating back to 1996: (i) endemic cyclic, characterised by predictable upsurges/outbreaks every two to four years, and (ii) epidemic, where rare virus types caused upsurges/outbreaks. Genetic analysis suggests continuous temporal displacement of virus lineages due to the accumulation of (silent) genetic changes. Non-synonymous changes in the antigenic B/C loop suggest antigenic diversification, which may affect population susceptibility. Infections were frequently detected at an age under three months and at an older, parenting age (25–49 years) pointing to a distinct role of immunity in the circulation patterns. Upsurges were detected in the summer and winter which can promote increased transmissibility underlying new (cyclic) upsurges and requires close monitoring. The combination of data provide a better understanding of NPEV circulation required to control and curtail upsurges and outbreaks. European Centre for Disease Prevention and Control (ECDC) 2016-09-29 /pmc/articles/PMC5069426/ /pubmed/27719752 http://dx.doi.org/10.2807/1560-7917.ES.2016.21.39.30352 Text en This article is copyright of The Authors, 2016. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY 4.0) Licence. You may share and adapt the material, but must give appropriate credit to the source, provide a link to the licence, and indicate if changes were made.
spellingShingle Surveillance and Outbreak Report
Benschop, Kimberley S M
Rahamat-Langendoen, Janette C
van der Avoort, Harrie G A M
Claas, Eric C J
Pas, Suzan D
Schuurman, Rob
Verweij, Jaco J
Wolthers, Katja C
Niesters, Hubert G M
Koopmans, Marion P G
VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014
title VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014
title_full VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014
title_fullStr VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014
title_full_unstemmed VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014
title_short VIRO-TypeNed, systematic molecular surveillance of enteroviruses in the Netherlands between 2010 and 2014
title_sort viro-typened, systematic molecular surveillance of enteroviruses in the netherlands between 2010 and 2014
topic Surveillance and Outbreak Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5069426/
https://www.ncbi.nlm.nih.gov/pubmed/27719752
http://dx.doi.org/10.2807/1560-7917.ES.2016.21.39.30352
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