Cargando…
Identification of amino acids related to catalytic function of Sulfolobus solfataricus P1 carboxylesterase by site-directed mutagenesis and molecular modeling
The archaeon Sulfolobus solfataricus P1 carboxylesterase is a thermostable enzyme with a molecular mass of 33.5 kDa belonging to the mammalian hormone-sensitive lipase (HSL) family. In our previous study, we purified the enzyme and suggested the expected amino acids related to its catalysis by chemi...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Society for Biochemistry and Molecular Biology
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5070724/ https://www.ncbi.nlm.nih.gov/pubmed/27222124 http://dx.doi.org/10.5483/BMBRep.2016.49.6.077 |
_version_ | 1782461185928462336 |
---|---|
author | Choi, Yun-Ho Lee, Ye-Na Park, Young-Jun Yoon, Sung-Jin Lee, Hee-Bong |
author_facet | Choi, Yun-Ho Lee, Ye-Na Park, Young-Jun Yoon, Sung-Jin Lee, Hee-Bong |
author_sort | Choi, Yun-Ho |
collection | PubMed |
description | The archaeon Sulfolobus solfataricus P1 carboxylesterase is a thermostable enzyme with a molecular mass of 33.5 kDa belonging to the mammalian hormone-sensitive lipase (HSL) family. In our previous study, we purified the enzyme and suggested the expected amino acids related to its catalysis by chemical modification and a sequence homology search. For further validating these amino acids in this study, we modified them using site-directed mutagenesis and examined the activity of the mutant enzymes using spectrophotometric analysis and then estimated by homology modeling and fluorescence analysis. As a result, it was identified that Ser151, Asp244, and His274 consist of a catalytic triad, and Gly80, Gly81, and Ala152 compose an oxyanion hole of the enzyme. In addition, it was also determined that the cysteine residues are located near the active site or at the positions inducing any conformational changes of the enzyme by their replacement with serine residues. [BMB Reports 2016; 49(6): 349-354] |
format | Online Article Text |
id | pubmed-5070724 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Korean Society for Biochemistry and Molecular Biology |
record_format | MEDLINE/PubMed |
spelling | pubmed-50707242016-10-20 Identification of amino acids related to catalytic function of Sulfolobus solfataricus P1 carboxylesterase by site-directed mutagenesis and molecular modeling Choi, Yun-Ho Lee, Ye-Na Park, Young-Jun Yoon, Sung-Jin Lee, Hee-Bong BMB Rep Research Articles The archaeon Sulfolobus solfataricus P1 carboxylesterase is a thermostable enzyme with a molecular mass of 33.5 kDa belonging to the mammalian hormone-sensitive lipase (HSL) family. In our previous study, we purified the enzyme and suggested the expected amino acids related to its catalysis by chemical modification and a sequence homology search. For further validating these amino acids in this study, we modified them using site-directed mutagenesis and examined the activity of the mutant enzymes using spectrophotometric analysis and then estimated by homology modeling and fluorescence analysis. As a result, it was identified that Ser151, Asp244, and His274 consist of a catalytic triad, and Gly80, Gly81, and Ala152 compose an oxyanion hole of the enzyme. In addition, it was also determined that the cysteine residues are located near the active site or at the positions inducing any conformational changes of the enzyme by their replacement with serine residues. [BMB Reports 2016; 49(6): 349-354] Korean Society for Biochemistry and Molecular Biology 2016-06-30 /pmc/articles/PMC5070724/ /pubmed/27222124 http://dx.doi.org/10.5483/BMBRep.2016.49.6.077 Text en Copyright © 2016, Korean Society for Biochemistry and Molecular Biology http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Choi, Yun-Ho Lee, Ye-Na Park, Young-Jun Yoon, Sung-Jin Lee, Hee-Bong Identification of amino acids related to catalytic function of Sulfolobus solfataricus P1 carboxylesterase by site-directed mutagenesis and molecular modeling |
title | Identification of amino acids related to catalytic function of Sulfolobus solfataricus P1 carboxylesterase by site-directed mutagenesis and molecular modeling |
title_full | Identification of amino acids related to catalytic function of Sulfolobus solfataricus P1 carboxylesterase by site-directed mutagenesis and molecular modeling |
title_fullStr | Identification of amino acids related to catalytic function of Sulfolobus solfataricus P1 carboxylesterase by site-directed mutagenesis and molecular modeling |
title_full_unstemmed | Identification of amino acids related to catalytic function of Sulfolobus solfataricus P1 carboxylesterase by site-directed mutagenesis and molecular modeling |
title_short | Identification of amino acids related to catalytic function of Sulfolobus solfataricus P1 carboxylesterase by site-directed mutagenesis and molecular modeling |
title_sort | identification of amino acids related to catalytic function of sulfolobus solfataricus p1 carboxylesterase by site-directed mutagenesis and molecular modeling |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5070724/ https://www.ncbi.nlm.nih.gov/pubmed/27222124 http://dx.doi.org/10.5483/BMBRep.2016.49.6.077 |
work_keys_str_mv | AT choiyunho identificationofaminoacidsrelatedtocatalyticfunctionofsulfolobussolfataricusp1carboxylesterasebysitedirectedmutagenesisandmolecularmodeling AT leeyena identificationofaminoacidsrelatedtocatalyticfunctionofsulfolobussolfataricusp1carboxylesterasebysitedirectedmutagenesisandmolecularmodeling AT parkyoungjun identificationofaminoacidsrelatedtocatalyticfunctionofsulfolobussolfataricusp1carboxylesterasebysitedirectedmutagenesisandmolecularmodeling AT yoonsungjin identificationofaminoacidsrelatedtocatalyticfunctionofsulfolobussolfataricusp1carboxylesterasebysitedirectedmutagenesisandmolecularmodeling AT leeheebong identificationofaminoacidsrelatedtocatalyticfunctionofsulfolobussolfataricusp1carboxylesterasebysitedirectedmutagenesisandmolecularmodeling |