Cargando…

Global Transcriptomic Analysis of the Response of Corynebacterium glutamicum to Vanillin

Lignocellulosic biomass is an abundant and renewable resource for biofuels and bio-based chemicals. Vanillin is one of the major phenolic inhibitors in biomass production using lignocellulose. To assess the response of Corynebacterium glutamicum to vanillin stress, we performed a global transcriptio...

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Can, Pan, Junfeng, Yang, Xiaobing, Guo, Chenghao, Ding, Wei, Si, Meiru, Zhang, Yi, Shen, Xihui, Wang, Yao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5070772/
https://www.ncbi.nlm.nih.gov/pubmed/27760214
http://dx.doi.org/10.1371/journal.pone.0164955
_version_ 1782461193888202752
author Chen, Can
Pan, Junfeng
Yang, Xiaobing
Guo, Chenghao
Ding, Wei
Si, Meiru
Zhang, Yi
Shen, Xihui
Wang, Yao
author_facet Chen, Can
Pan, Junfeng
Yang, Xiaobing
Guo, Chenghao
Ding, Wei
Si, Meiru
Zhang, Yi
Shen, Xihui
Wang, Yao
author_sort Chen, Can
collection PubMed
description Lignocellulosic biomass is an abundant and renewable resource for biofuels and bio-based chemicals. Vanillin is one of the major phenolic inhibitors in biomass production using lignocellulose. To assess the response of Corynebacterium glutamicum to vanillin stress, we performed a global transcriptional response analysis. The transcriptional data showed that the vanillin stress not only affected the genes involved in degradation of vanillin, but also differentially regulated several genes related to the stress response, ribosome/translation, protein secretion, and the cell envelope. Moreover, deletion of the sigH or msrA gene in C. glutamicum resulted in a decrease in cell viability under vanillin stress. These insights will promote further engineering of model industrial strains, with enhanced tolerance or degradation ability to vanillin to enable suitable production of biofuels and bio-based chemicals from lignocellulosic biomass.
format Online
Article
Text
id pubmed-5070772
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-50707722016-10-27 Global Transcriptomic Analysis of the Response of Corynebacterium glutamicum to Vanillin Chen, Can Pan, Junfeng Yang, Xiaobing Guo, Chenghao Ding, Wei Si, Meiru Zhang, Yi Shen, Xihui Wang, Yao PLoS One Research Article Lignocellulosic biomass is an abundant and renewable resource for biofuels and bio-based chemicals. Vanillin is one of the major phenolic inhibitors in biomass production using lignocellulose. To assess the response of Corynebacterium glutamicum to vanillin stress, we performed a global transcriptional response analysis. The transcriptional data showed that the vanillin stress not only affected the genes involved in degradation of vanillin, but also differentially regulated several genes related to the stress response, ribosome/translation, protein secretion, and the cell envelope. Moreover, deletion of the sigH or msrA gene in C. glutamicum resulted in a decrease in cell viability under vanillin stress. These insights will promote further engineering of model industrial strains, with enhanced tolerance or degradation ability to vanillin to enable suitable production of biofuels and bio-based chemicals from lignocellulosic biomass. Public Library of Science 2016-10-19 /pmc/articles/PMC5070772/ /pubmed/27760214 http://dx.doi.org/10.1371/journal.pone.0164955 Text en © 2016 Chen et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Chen, Can
Pan, Junfeng
Yang, Xiaobing
Guo, Chenghao
Ding, Wei
Si, Meiru
Zhang, Yi
Shen, Xihui
Wang, Yao
Global Transcriptomic Analysis of the Response of Corynebacterium glutamicum to Vanillin
title Global Transcriptomic Analysis of the Response of Corynebacterium glutamicum to Vanillin
title_full Global Transcriptomic Analysis of the Response of Corynebacterium glutamicum to Vanillin
title_fullStr Global Transcriptomic Analysis of the Response of Corynebacterium glutamicum to Vanillin
title_full_unstemmed Global Transcriptomic Analysis of the Response of Corynebacterium glutamicum to Vanillin
title_short Global Transcriptomic Analysis of the Response of Corynebacterium glutamicum to Vanillin
title_sort global transcriptomic analysis of the response of corynebacterium glutamicum to vanillin
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5070772/
https://www.ncbi.nlm.nih.gov/pubmed/27760214
http://dx.doi.org/10.1371/journal.pone.0164955
work_keys_str_mv AT chencan globaltranscriptomicanalysisoftheresponseofcorynebacteriumglutamicumtovanillin
AT panjunfeng globaltranscriptomicanalysisoftheresponseofcorynebacteriumglutamicumtovanillin
AT yangxiaobing globaltranscriptomicanalysisoftheresponseofcorynebacteriumglutamicumtovanillin
AT guochenghao globaltranscriptomicanalysisoftheresponseofcorynebacteriumglutamicumtovanillin
AT dingwei globaltranscriptomicanalysisoftheresponseofcorynebacteriumglutamicumtovanillin
AT simeiru globaltranscriptomicanalysisoftheresponseofcorynebacteriumglutamicumtovanillin
AT zhangyi globaltranscriptomicanalysisoftheresponseofcorynebacteriumglutamicumtovanillin
AT shenxihui globaltranscriptomicanalysisoftheresponseofcorynebacteriumglutamicumtovanillin
AT wangyao globaltranscriptomicanalysisoftheresponseofcorynebacteriumglutamicumtovanillin