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Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz
The present study assesses the diversity and composition of sediment bacterial and microeukaryotic communities from deep-sea mud volcanoes (MVs) associated with strike-slip faults in the South-West Iberian Margin (SWIM). We used a 16S/18S rRNA gene based pyrosequencing approach to characterize and c...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5071872/ https://www.ncbi.nlm.nih.gov/pubmed/27762306 http://dx.doi.org/10.1038/srep35272 |
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author | Coelho, Francisco J. R. C. Louvado, António Domingues, Patrícia M. Cleary, Daniel F. R. Ferreira, Marina Almeida, Adelaide Cunha, Marina R. Cunha, Ângela Gomes, Newton C. M. |
author_facet | Coelho, Francisco J. R. C. Louvado, António Domingues, Patrícia M. Cleary, Daniel F. R. Ferreira, Marina Almeida, Adelaide Cunha, Marina R. Cunha, Ângela Gomes, Newton C. M. |
author_sort | Coelho, Francisco J. R. C. |
collection | PubMed |
description | The present study assesses the diversity and composition of sediment bacterial and microeukaryotic communities from deep-sea mud volcanoes (MVs) associated with strike-slip faults in the South-West Iberian Margin (SWIM). We used a 16S/18S rRNA gene based pyrosequencing approach to characterize and correlate the sediment bacterial and microeukaryotic communities from MVs with differing gas seep regimes and from an additional site with no apparent seeping activity. In general, our results showed significant compositional changes of bacterial and microeukaryotic communities in sampling sites with different seepage regimes. Sediment bacterial communities were enriched with Methylococcales (putative methanotrophs) but had lower abundances of Rhodospirillales, Nitrospirales and SAR202 in the more active MVs. Within microeukaryotic communities, members of the Lobosa (lobose amoebae) were enriched in more active MVs. We also showed a strong correlation between Methylococcales populations and lobose amoeba in active MVs. This study provides baseline information on the diversity and composition of bacterial and microeukaryotic communities in deep-sea MVs associated with strike-slip faults. |
format | Online Article Text |
id | pubmed-5071872 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50718722016-10-26 Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz Coelho, Francisco J. R. C. Louvado, António Domingues, Patrícia M. Cleary, Daniel F. R. Ferreira, Marina Almeida, Adelaide Cunha, Marina R. Cunha, Ângela Gomes, Newton C. M. Sci Rep Article The present study assesses the diversity and composition of sediment bacterial and microeukaryotic communities from deep-sea mud volcanoes (MVs) associated with strike-slip faults in the South-West Iberian Margin (SWIM). We used a 16S/18S rRNA gene based pyrosequencing approach to characterize and correlate the sediment bacterial and microeukaryotic communities from MVs with differing gas seep regimes and from an additional site with no apparent seeping activity. In general, our results showed significant compositional changes of bacterial and microeukaryotic communities in sampling sites with different seepage regimes. Sediment bacterial communities were enriched with Methylococcales (putative methanotrophs) but had lower abundances of Rhodospirillales, Nitrospirales and SAR202 in the more active MVs. Within microeukaryotic communities, members of the Lobosa (lobose amoebae) were enriched in more active MVs. We also showed a strong correlation between Methylococcales populations and lobose amoeba in active MVs. This study provides baseline information on the diversity and composition of bacterial and microeukaryotic communities in deep-sea MVs associated with strike-slip faults. Nature Publishing Group 2016-10-20 /pmc/articles/PMC5071872/ /pubmed/27762306 http://dx.doi.org/10.1038/srep35272 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Coelho, Francisco J. R. C. Louvado, António Domingues, Patrícia M. Cleary, Daniel F. R. Ferreira, Marina Almeida, Adelaide Cunha, Marina R. Cunha, Ângela Gomes, Newton C. M. Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz |
title | Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz |
title_full | Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz |
title_fullStr | Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz |
title_full_unstemmed | Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz |
title_short | Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz |
title_sort | integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the gulf of cadiz |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5071872/ https://www.ncbi.nlm.nih.gov/pubmed/27762306 http://dx.doi.org/10.1038/srep35272 |
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