High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1(T) Isolated from Great Boiling Spring, Nevada

The draft genome of Thermocrinis jamiesonii GBS1(T) is 1,315,625 bp in 10 contigs and encodes 1,463 predicted genes. The presence of sox genes and various glycoside hydrolases and the absence of uptake NiFe hydrogenases (hyaB) are consistent with a requirement for thiosulfate and suggest the ability...

Descripción completa

Detalles Bibliográficos
Autores principales: Ganji, Rakesh, Murugapiran, Senthil K., Ong, John C., Manoharan, Namritha, Huntemann, Marcel, Clum, Alicia, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T. B. K., Ngan, Chew Yee, Daum, Chris, Duffy, Kecia, Shapiro, Nicole, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Woyke, Tanja, Dodsworth, Jeremy A., Hedlund, Brian P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2016
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5073254/
https://www.ncbi.nlm.nih.gov/pubmed/27795267
http://dx.doi.org/10.1128/genomeA.01112-16
_version_ 1782461535296159744
author Ganji, Rakesh
Murugapiran, Senthil K.
Ong, John C.
Manoharan, Namritha
Huntemann, Marcel
Clum, Alicia
Pillay, Manoj
Palaniappan, Krishnaveni
Varghese, Neha
Mikhailova, Natalia
Stamatis, Dimitrios
Reddy, T. B. K.
Ngan, Chew Yee
Daum, Chris
Duffy, Kecia
Shapiro, Nicole
Markowitz, Victor
Ivanova, Natalia
Kyrpides, Nikos
Woyke, Tanja
Dodsworth, Jeremy A.
Hedlund, Brian P.
author_facet Ganji, Rakesh
Murugapiran, Senthil K.
Ong, John C.
Manoharan, Namritha
Huntemann, Marcel
Clum, Alicia
Pillay, Manoj
Palaniappan, Krishnaveni
Varghese, Neha
Mikhailova, Natalia
Stamatis, Dimitrios
Reddy, T. B. K.
Ngan, Chew Yee
Daum, Chris
Duffy, Kecia
Shapiro, Nicole
Markowitz, Victor
Ivanova, Natalia
Kyrpides, Nikos
Woyke, Tanja
Dodsworth, Jeremy A.
Hedlund, Brian P.
author_sort Ganji, Rakesh
collection PubMed
description The draft genome of Thermocrinis jamiesonii GBS1(T) is 1,315,625 bp in 10 contigs and encodes 1,463 predicted genes. The presence of sox genes and various glycoside hydrolases and the absence of uptake NiFe hydrogenases (hyaB) are consistent with a requirement for thiosulfate and suggest the ability to use carbohydrate polymers.
format Online
Article
Text
id pubmed-5073254
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-50732542016-10-24 High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1(T) Isolated from Great Boiling Spring, Nevada Ganji, Rakesh Murugapiran, Senthil K. Ong, John C. Manoharan, Namritha Huntemann, Marcel Clum, Alicia Pillay, Manoj Palaniappan, Krishnaveni Varghese, Neha Mikhailova, Natalia Stamatis, Dimitrios Reddy, T. B. K. Ngan, Chew Yee Daum, Chris Duffy, Kecia Shapiro, Nicole Markowitz, Victor Ivanova, Natalia Kyrpides, Nikos Woyke, Tanja Dodsworth, Jeremy A. Hedlund, Brian P. Genome Announc Prokaryotes The draft genome of Thermocrinis jamiesonii GBS1(T) is 1,315,625 bp in 10 contigs and encodes 1,463 predicted genes. The presence of sox genes and various glycoside hydrolases and the absence of uptake NiFe hydrogenases (hyaB) are consistent with a requirement for thiosulfate and suggest the ability to use carbohydrate polymers. American Society for Microbiology 2016-10-20 /pmc/articles/PMC5073254/ /pubmed/27795267 http://dx.doi.org/10.1128/genomeA.01112-16 Text en Copyright © 2016 Ganji et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle Prokaryotes
Ganji, Rakesh
Murugapiran, Senthil K.
Ong, John C.
Manoharan, Namritha
Huntemann, Marcel
Clum, Alicia
Pillay, Manoj
Palaniappan, Krishnaveni
Varghese, Neha
Mikhailova, Natalia
Stamatis, Dimitrios
Reddy, T. B. K.
Ngan, Chew Yee
Daum, Chris
Duffy, Kecia
Shapiro, Nicole
Markowitz, Victor
Ivanova, Natalia
Kyrpides, Nikos
Woyke, Tanja
Dodsworth, Jeremy A.
Hedlund, Brian P.
High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1(T) Isolated from Great Boiling Spring, Nevada
title High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1(T) Isolated from Great Boiling Spring, Nevada
title_full High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1(T) Isolated from Great Boiling Spring, Nevada
title_fullStr High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1(T) Isolated from Great Boiling Spring, Nevada
title_full_unstemmed High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1(T) Isolated from Great Boiling Spring, Nevada
title_short High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1(T) Isolated from Great Boiling Spring, Nevada
title_sort high-quality draft genome sequence of thermocrinis jamiesonii gbs1(t) isolated from great boiling spring, nevada
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5073254/
https://www.ncbi.nlm.nih.gov/pubmed/27795267
http://dx.doi.org/10.1128/genomeA.01112-16
work_keys_str_mv AT ganjirakesh highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT murugapiransenthilk highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT ongjohnc highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT manoharannamritha highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT huntemannmarcel highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT clumalicia highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT pillaymanoj highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT palaniappankrishnaveni highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT vargheseneha highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT mikhailovanatalia highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT stamatisdimitrios highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT reddytbk highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT nganchewyee highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT daumchris highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT duffykecia highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT shapironicole highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT markowitzvictor highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT ivanovanatalia highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT kyrpidesnikos highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT woyketanja highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT dodsworthjeremya highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada
AT hedlundbrianp highqualitydraftgenomesequenceofthermocrinisjamiesoniigbs1tisolatedfromgreatboilingspringnevada

Ejemplares similares