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The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans
Following its immergence in December 2013, the recent Zaire Ebola virus (EBOV) outbreak in West Africa has spread and persisted for more than two years, making it the largest EBOV epidemic in both scale and geographical region to date. In this study, a total of 726 glycoprotein (GP) gene sequences o...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5073338/ https://www.ncbi.nlm.nih.gov/pubmed/27767073 http://dx.doi.org/10.1038/srep35822 |
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author | Li, Xingguang Zai, Junjie Liu, Haizhou Feng, Yi Li, Fan Wei, Jing Zou, Sen Yuan, Zhiming Shao, Yiming |
author_facet | Li, Xingguang Zai, Junjie Liu, Haizhou Feng, Yi Li, Fan Wei, Jing Zou, Sen Yuan, Zhiming Shao, Yiming |
author_sort | Li, Xingguang |
collection | PubMed |
description | Following its immergence in December 2013, the recent Zaire Ebola virus (EBOV) outbreak in West Africa has spread and persisted for more than two years, making it the largest EBOV epidemic in both scale and geographical region to date. In this study, a total of 726 glycoprotein (GP) gene sequences of the EBOV full-length genome obtained from West Africa from the 2014 outbreak, combined with 30 from earlier outbreaks between 1976 and 2008 were used to investigate the genetic divergence, evolutionary history, population dynamics, and selection pressure of EBOV among distinct epidemic waves. Results from our dataset showed that no non-synonymous substitutions occurred on the GP gene coding sequences of EBOV that were likely to have affected protein structure or function in any way. Furthermore, the significantly different dN/dS ratios observed between the 2014 West African outbreak and earlier outbreaks were more likely due to the confounding presence of segregating polymorphisms. Our results highlight no robust evidence that the 2014 EBOV outbreak is fast-evolving and adapting to humans. Therefore, the unprecedented nature of the 2014 EBOV outbreak might be more likely related to non-virological elements, such as environmental and sociological factors. |
format | Online Article Text |
id | pubmed-5073338 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50733382016-10-26 The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans Li, Xingguang Zai, Junjie Liu, Haizhou Feng, Yi Li, Fan Wei, Jing Zou, Sen Yuan, Zhiming Shao, Yiming Sci Rep Article Following its immergence in December 2013, the recent Zaire Ebola virus (EBOV) outbreak in West Africa has spread and persisted for more than two years, making it the largest EBOV epidemic in both scale and geographical region to date. In this study, a total of 726 glycoprotein (GP) gene sequences of the EBOV full-length genome obtained from West Africa from the 2014 outbreak, combined with 30 from earlier outbreaks between 1976 and 2008 were used to investigate the genetic divergence, evolutionary history, population dynamics, and selection pressure of EBOV among distinct epidemic waves. Results from our dataset showed that no non-synonymous substitutions occurred on the GP gene coding sequences of EBOV that were likely to have affected protein structure or function in any way. Furthermore, the significantly different dN/dS ratios observed between the 2014 West African outbreak and earlier outbreaks were more likely due to the confounding presence of segregating polymorphisms. Our results highlight no robust evidence that the 2014 EBOV outbreak is fast-evolving and adapting to humans. Therefore, the unprecedented nature of the 2014 EBOV outbreak might be more likely related to non-virological elements, such as environmental and sociological factors. Nature Publishing Group 2016-10-21 /pmc/articles/PMC5073338/ /pubmed/27767073 http://dx.doi.org/10.1038/srep35822 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Li, Xingguang Zai, Junjie Liu, Haizhou Feng, Yi Li, Fan Wei, Jing Zou, Sen Yuan, Zhiming Shao, Yiming The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans |
title | The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans |
title_full | The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans |
title_fullStr | The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans |
title_full_unstemmed | The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans |
title_short | The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans |
title_sort | 2014 ebola virus outbreak in west africa highlights no evidence of rapid evolution or adaptation to humans |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5073338/ https://www.ncbi.nlm.nih.gov/pubmed/27767073 http://dx.doi.org/10.1038/srep35822 |
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