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The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans

Following its immergence in December 2013, the recent Zaire Ebola virus (EBOV) outbreak in West Africa has spread and persisted for more than two years, making it the largest EBOV epidemic in both scale and geographical region to date. In this study, a total of 726 glycoprotein (GP) gene sequences o...

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Autores principales: Li, Xingguang, Zai, Junjie, Liu, Haizhou, Feng, Yi, Li, Fan, Wei, Jing, Zou, Sen, Yuan, Zhiming, Shao, Yiming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5073338/
https://www.ncbi.nlm.nih.gov/pubmed/27767073
http://dx.doi.org/10.1038/srep35822
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author Li, Xingguang
Zai, Junjie
Liu, Haizhou
Feng, Yi
Li, Fan
Wei, Jing
Zou, Sen
Yuan, Zhiming
Shao, Yiming
author_facet Li, Xingguang
Zai, Junjie
Liu, Haizhou
Feng, Yi
Li, Fan
Wei, Jing
Zou, Sen
Yuan, Zhiming
Shao, Yiming
author_sort Li, Xingguang
collection PubMed
description Following its immergence in December 2013, the recent Zaire Ebola virus (EBOV) outbreak in West Africa has spread and persisted for more than two years, making it the largest EBOV epidemic in both scale and geographical region to date. In this study, a total of 726 glycoprotein (GP) gene sequences of the EBOV full-length genome obtained from West Africa from the 2014 outbreak, combined with 30 from earlier outbreaks between 1976 and 2008 were used to investigate the genetic divergence, evolutionary history, population dynamics, and selection pressure of EBOV among distinct epidemic waves. Results from our dataset showed that no non-synonymous substitutions occurred on the GP gene coding sequences of EBOV that were likely to have affected protein structure or function in any way. Furthermore, the significantly different dN/dS ratios observed between the 2014 West African outbreak and earlier outbreaks were more likely due to the confounding presence of segregating polymorphisms. Our results highlight no robust evidence that the 2014 EBOV outbreak is fast-evolving and adapting to humans. Therefore, the unprecedented nature of the 2014 EBOV outbreak might be more likely related to non-virological elements, such as environmental and sociological factors.
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spelling pubmed-50733382016-10-26 The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans Li, Xingguang Zai, Junjie Liu, Haizhou Feng, Yi Li, Fan Wei, Jing Zou, Sen Yuan, Zhiming Shao, Yiming Sci Rep Article Following its immergence in December 2013, the recent Zaire Ebola virus (EBOV) outbreak in West Africa has spread and persisted for more than two years, making it the largest EBOV epidemic in both scale and geographical region to date. In this study, a total of 726 glycoprotein (GP) gene sequences of the EBOV full-length genome obtained from West Africa from the 2014 outbreak, combined with 30 from earlier outbreaks between 1976 and 2008 were used to investigate the genetic divergence, evolutionary history, population dynamics, and selection pressure of EBOV among distinct epidemic waves. Results from our dataset showed that no non-synonymous substitutions occurred on the GP gene coding sequences of EBOV that were likely to have affected protein structure or function in any way. Furthermore, the significantly different dN/dS ratios observed between the 2014 West African outbreak and earlier outbreaks were more likely due to the confounding presence of segregating polymorphisms. Our results highlight no robust evidence that the 2014 EBOV outbreak is fast-evolving and adapting to humans. Therefore, the unprecedented nature of the 2014 EBOV outbreak might be more likely related to non-virological elements, such as environmental and sociological factors. Nature Publishing Group 2016-10-21 /pmc/articles/PMC5073338/ /pubmed/27767073 http://dx.doi.org/10.1038/srep35822 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Li, Xingguang
Zai, Junjie
Liu, Haizhou
Feng, Yi
Li, Fan
Wei, Jing
Zou, Sen
Yuan, Zhiming
Shao, Yiming
The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans
title The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans
title_full The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans
title_fullStr The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans
title_full_unstemmed The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans
title_short The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans
title_sort 2014 ebola virus outbreak in west africa highlights no evidence of rapid evolution or adaptation to humans
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5073338/
https://www.ncbi.nlm.nih.gov/pubmed/27767073
http://dx.doi.org/10.1038/srep35822
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