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Estimating the population abundance of tissue-infiltrating immune and stromal cell populations using gene expression
We introduce the Microenvironment Cell Populations-counter (MCP-counter) method, which allows the robust quantification of the absolute abundance of eight immune and two stromal cell populations in heterogeneous tissues from transcriptomic data. We present in vitro mRNA mixture and ex vivo immunohis...
Autores principales: | Becht, Etienne, Giraldo, Nicolas A., Lacroix, Laetitia, Buttard, Bénédicte, Elarouci, Nabila, Petitprez, Florent, Selves, Janick, Laurent-Puig, Pierre, Sautès-Fridman, Catherine, Fridman, Wolf H., de Reyniès, Aurélien |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5073889/ https://www.ncbi.nlm.nih.gov/pubmed/27765066 http://dx.doi.org/10.1186/s13059-016-1070-5 |
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