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A network property necessary for concentration robustness

Maintenance of functionality of complex cellular networks and entire organisms exposed to environmental perturbations often depends on concentration robustness of the underlying components. Yet, the reasons and consequences of concentration robustness in large-scale cellular networks remain largely...

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Autores principales: Eloundou-Mbebi, Jeanne M. O., Küken, Anika, Omranian, Nooshin, Kleessen, Sabrina, Neigenfind, Jost, Basler, Georg, Nikoloski, Zoran
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5075777/
https://www.ncbi.nlm.nih.gov/pubmed/27759015
http://dx.doi.org/10.1038/ncomms13255
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author Eloundou-Mbebi, Jeanne M. O.
Küken, Anika
Omranian, Nooshin
Kleessen, Sabrina
Neigenfind, Jost
Basler, Georg
Nikoloski, Zoran
author_facet Eloundou-Mbebi, Jeanne M. O.
Küken, Anika
Omranian, Nooshin
Kleessen, Sabrina
Neigenfind, Jost
Basler, Georg
Nikoloski, Zoran
author_sort Eloundou-Mbebi, Jeanne M. O.
collection PubMed
description Maintenance of functionality of complex cellular networks and entire organisms exposed to environmental perturbations often depends on concentration robustness of the underlying components. Yet, the reasons and consequences of concentration robustness in large-scale cellular networks remain largely unknown. Here, we derive a necessary condition for concentration robustness based only on the structure of networks endowed with mass action kinetics. The structural condition can be used to design targeted experiments to study concentration robustness. We show that metabolites satisfying the necessary condition are present in metabolic networks from diverse species, suggesting prevalence of this property across kingdoms of life. We also demonstrate that our predictions about concentration robustness of energy-related metabolites are in line with experimental evidence from Escherichia coli. The necessary condition is applicable to mass action biological systems of arbitrary size, and will enable understanding the implications of concentration robustness in genetic engineering strategies and medical applications.
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spelling pubmed-50757772016-10-28 A network property necessary for concentration robustness Eloundou-Mbebi, Jeanne M. O. Küken, Anika Omranian, Nooshin Kleessen, Sabrina Neigenfind, Jost Basler, Georg Nikoloski, Zoran Nat Commun Article Maintenance of functionality of complex cellular networks and entire organisms exposed to environmental perturbations often depends on concentration robustness of the underlying components. Yet, the reasons and consequences of concentration robustness in large-scale cellular networks remain largely unknown. Here, we derive a necessary condition for concentration robustness based only on the structure of networks endowed with mass action kinetics. The structural condition can be used to design targeted experiments to study concentration robustness. We show that metabolites satisfying the necessary condition are present in metabolic networks from diverse species, suggesting prevalence of this property across kingdoms of life. We also demonstrate that our predictions about concentration robustness of energy-related metabolites are in line with experimental evidence from Escherichia coli. The necessary condition is applicable to mass action biological systems of arbitrary size, and will enable understanding the implications of concentration robustness in genetic engineering strategies and medical applications. Nature Publishing Group 2016-10-19 /pmc/articles/PMC5075777/ /pubmed/27759015 http://dx.doi.org/10.1038/ncomms13255 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Eloundou-Mbebi, Jeanne M. O.
Küken, Anika
Omranian, Nooshin
Kleessen, Sabrina
Neigenfind, Jost
Basler, Georg
Nikoloski, Zoran
A network property necessary for concentration robustness
title A network property necessary for concentration robustness
title_full A network property necessary for concentration robustness
title_fullStr A network property necessary for concentration robustness
title_full_unstemmed A network property necessary for concentration robustness
title_short A network property necessary for concentration robustness
title_sort network property necessary for concentration robustness
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5075777/
https://www.ncbi.nlm.nih.gov/pubmed/27759015
http://dx.doi.org/10.1038/ncomms13255
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