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A network property necessary for concentration robustness
Maintenance of functionality of complex cellular networks and entire organisms exposed to environmental perturbations often depends on concentration robustness of the underlying components. Yet, the reasons and consequences of concentration robustness in large-scale cellular networks remain largely...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5075777/ https://www.ncbi.nlm.nih.gov/pubmed/27759015 http://dx.doi.org/10.1038/ncomms13255 |
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author | Eloundou-Mbebi, Jeanne M. O. Küken, Anika Omranian, Nooshin Kleessen, Sabrina Neigenfind, Jost Basler, Georg Nikoloski, Zoran |
author_facet | Eloundou-Mbebi, Jeanne M. O. Küken, Anika Omranian, Nooshin Kleessen, Sabrina Neigenfind, Jost Basler, Georg Nikoloski, Zoran |
author_sort | Eloundou-Mbebi, Jeanne M. O. |
collection | PubMed |
description | Maintenance of functionality of complex cellular networks and entire organisms exposed to environmental perturbations often depends on concentration robustness of the underlying components. Yet, the reasons and consequences of concentration robustness in large-scale cellular networks remain largely unknown. Here, we derive a necessary condition for concentration robustness based only on the structure of networks endowed with mass action kinetics. The structural condition can be used to design targeted experiments to study concentration robustness. We show that metabolites satisfying the necessary condition are present in metabolic networks from diverse species, suggesting prevalence of this property across kingdoms of life. We also demonstrate that our predictions about concentration robustness of energy-related metabolites are in line with experimental evidence from Escherichia coli. The necessary condition is applicable to mass action biological systems of arbitrary size, and will enable understanding the implications of concentration robustness in genetic engineering strategies and medical applications. |
format | Online Article Text |
id | pubmed-5075777 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50757772016-10-28 A network property necessary for concentration robustness Eloundou-Mbebi, Jeanne M. O. Küken, Anika Omranian, Nooshin Kleessen, Sabrina Neigenfind, Jost Basler, Georg Nikoloski, Zoran Nat Commun Article Maintenance of functionality of complex cellular networks and entire organisms exposed to environmental perturbations often depends on concentration robustness of the underlying components. Yet, the reasons and consequences of concentration robustness in large-scale cellular networks remain largely unknown. Here, we derive a necessary condition for concentration robustness based only on the structure of networks endowed with mass action kinetics. The structural condition can be used to design targeted experiments to study concentration robustness. We show that metabolites satisfying the necessary condition are present in metabolic networks from diverse species, suggesting prevalence of this property across kingdoms of life. We also demonstrate that our predictions about concentration robustness of energy-related metabolites are in line with experimental evidence from Escherichia coli. The necessary condition is applicable to mass action biological systems of arbitrary size, and will enable understanding the implications of concentration robustness in genetic engineering strategies and medical applications. Nature Publishing Group 2016-10-19 /pmc/articles/PMC5075777/ /pubmed/27759015 http://dx.doi.org/10.1038/ncomms13255 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Eloundou-Mbebi, Jeanne M. O. Küken, Anika Omranian, Nooshin Kleessen, Sabrina Neigenfind, Jost Basler, Georg Nikoloski, Zoran A network property necessary for concentration robustness |
title | A network property necessary for concentration robustness |
title_full | A network property necessary for concentration robustness |
title_fullStr | A network property necessary for concentration robustness |
title_full_unstemmed | A network property necessary for concentration robustness |
title_short | A network property necessary for concentration robustness |
title_sort | network property necessary for concentration robustness |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5075777/ https://www.ncbi.nlm.nih.gov/pubmed/27759015 http://dx.doi.org/10.1038/ncomms13255 |
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