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Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1)

PREMISE OF THE STUDY: Nonplastid microsatellite primers were developed for the first time in the Euro-Siberian complex of Anthoxanthum (Poaceae), a genus of temperate grasses in which reticulate evolution is common. METHODS AND RESULTS: A microsatellite-enriched genomic DNA library allowed the detec...

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Autores principales: Lema-Suárez, Irene, Sahuquillo, Elvira, Marí-Mena, Neus, Pimentel, Manuel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5077285/
https://www.ncbi.nlm.nih.gov/pubmed/27785386
http://dx.doi.org/10.3732/apps.1600070
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author Lema-Suárez, Irene
Sahuquillo, Elvira
Marí-Mena, Neus
Pimentel, Manuel
author_facet Lema-Suárez, Irene
Sahuquillo, Elvira
Marí-Mena, Neus
Pimentel, Manuel
author_sort Lema-Suárez, Irene
collection PubMed
description PREMISE OF THE STUDY: Nonplastid microsatellite primers were developed for the first time in the Euro-Siberian complex of Anthoxanthum (Poaceae), a genus of temperate grasses in which reticulate evolution is common. METHODS AND RESULTS: A microsatellite-enriched genomic DNA library allowed the detection of 500 fragments containing a microsatellite motif. Fifteen primer pairs were selected for an extended primer test. A preliminary analysis was conducted on the Eurasian diploid lineages of Anthoxanthum, with special emphasis on three populations of the Mediterranean A. aristatum–A. ovatum complex. Thirteen out of 15 markers tested were polymorphic in the complex, with successful cross-amplification in A. odoratum (93% polymorphic loci), A. amarum (73% polymorphic), A. alpinum (73% polymorphic), and A. maderense (60% polymorphic). CONCLUSIONS: These microsatellite markers will enable the analysis of evolution and phylogeography in diploid and polyploid lineages of this important genus.
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spelling pubmed-50772852016-10-26 Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1) Lema-Suárez, Irene Sahuquillo, Elvira Marí-Mena, Neus Pimentel, Manuel Appl Plant Sci Primer Note PREMISE OF THE STUDY: Nonplastid microsatellite primers were developed for the first time in the Euro-Siberian complex of Anthoxanthum (Poaceae), a genus of temperate grasses in which reticulate evolution is common. METHODS AND RESULTS: A microsatellite-enriched genomic DNA library allowed the detection of 500 fragments containing a microsatellite motif. Fifteen primer pairs were selected for an extended primer test. A preliminary analysis was conducted on the Eurasian diploid lineages of Anthoxanthum, with special emphasis on three populations of the Mediterranean A. aristatum–A. ovatum complex. Thirteen out of 15 markers tested were polymorphic in the complex, with successful cross-amplification in A. odoratum (93% polymorphic loci), A. amarum (73% polymorphic), A. alpinum (73% polymorphic), and A. maderense (60% polymorphic). CONCLUSIONS: These microsatellite markers will enable the analysis of evolution and phylogeography in diploid and polyploid lineages of this important genus. Botanical Society of America 2016-10-13 /pmc/articles/PMC5077285/ /pubmed/27785386 http://dx.doi.org/10.3732/apps.1600070 Text en © 2016 Lema-Suárez et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Lema-Suárez, Irene
Sahuquillo, Elvira
Marí-Mena, Neus
Pimentel, Manuel
Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1)
title Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1)
title_full Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1)
title_fullStr Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1)
title_full_unstemmed Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1)
title_short Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1)
title_sort polymorphic microsatellite markers in anthoxanthum (poaceae) and cross-amplification in the eurasian complex of the genus(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5077285/
https://www.ncbi.nlm.nih.gov/pubmed/27785386
http://dx.doi.org/10.3732/apps.1600070
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