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Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1)
PREMISE OF THE STUDY: Nonplastid microsatellite primers were developed for the first time in the Euro-Siberian complex of Anthoxanthum (Poaceae), a genus of temperate grasses in which reticulate evolution is common. METHODS AND RESULTS: A microsatellite-enriched genomic DNA library allowed the detec...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5077285/ https://www.ncbi.nlm.nih.gov/pubmed/27785386 http://dx.doi.org/10.3732/apps.1600070 |
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author | Lema-Suárez, Irene Sahuquillo, Elvira Marí-Mena, Neus Pimentel, Manuel |
author_facet | Lema-Suárez, Irene Sahuquillo, Elvira Marí-Mena, Neus Pimentel, Manuel |
author_sort | Lema-Suárez, Irene |
collection | PubMed |
description | PREMISE OF THE STUDY: Nonplastid microsatellite primers were developed for the first time in the Euro-Siberian complex of Anthoxanthum (Poaceae), a genus of temperate grasses in which reticulate evolution is common. METHODS AND RESULTS: A microsatellite-enriched genomic DNA library allowed the detection of 500 fragments containing a microsatellite motif. Fifteen primer pairs were selected for an extended primer test. A preliminary analysis was conducted on the Eurasian diploid lineages of Anthoxanthum, with special emphasis on three populations of the Mediterranean A. aristatum–A. ovatum complex. Thirteen out of 15 markers tested were polymorphic in the complex, with successful cross-amplification in A. odoratum (93% polymorphic loci), A. amarum (73% polymorphic), A. alpinum (73% polymorphic), and A. maderense (60% polymorphic). CONCLUSIONS: These microsatellite markers will enable the analysis of evolution and phylogeography in diploid and polyploid lineages of this important genus. |
format | Online Article Text |
id | pubmed-5077285 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-50772852016-10-26 Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1) Lema-Suárez, Irene Sahuquillo, Elvira Marí-Mena, Neus Pimentel, Manuel Appl Plant Sci Primer Note PREMISE OF THE STUDY: Nonplastid microsatellite primers were developed for the first time in the Euro-Siberian complex of Anthoxanthum (Poaceae), a genus of temperate grasses in which reticulate evolution is common. METHODS AND RESULTS: A microsatellite-enriched genomic DNA library allowed the detection of 500 fragments containing a microsatellite motif. Fifteen primer pairs were selected for an extended primer test. A preliminary analysis was conducted on the Eurasian diploid lineages of Anthoxanthum, with special emphasis on three populations of the Mediterranean A. aristatum–A. ovatum complex. Thirteen out of 15 markers tested were polymorphic in the complex, with successful cross-amplification in A. odoratum (93% polymorphic loci), A. amarum (73% polymorphic), A. alpinum (73% polymorphic), and A. maderense (60% polymorphic). CONCLUSIONS: These microsatellite markers will enable the analysis of evolution and phylogeography in diploid and polyploid lineages of this important genus. Botanical Society of America 2016-10-13 /pmc/articles/PMC5077285/ /pubmed/27785386 http://dx.doi.org/10.3732/apps.1600070 Text en © 2016 Lema-Suárez et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Lema-Suárez, Irene Sahuquillo, Elvira Marí-Mena, Neus Pimentel, Manuel Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1) |
title | Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1) |
title_full | Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1) |
title_fullStr | Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1) |
title_full_unstemmed | Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1) |
title_short | Polymorphic microsatellite markers in Anthoxanthum (Poaceae) and cross-amplification in the Eurasian complex of the genus(1) |
title_sort | polymorphic microsatellite markers in anthoxanthum (poaceae) and cross-amplification in the eurasian complex of the genus(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5077285/ https://www.ncbi.nlm.nih.gov/pubmed/27785386 http://dx.doi.org/10.3732/apps.1600070 |
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