Cargando…

Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system

The subterranean world hosts up to one-fifth of all biomass, including microbial communities that drive transformations central to Earth's biogeochemical cycles. However, little is known about how complex microbial communities in such environments are structured, and how inter-organism interact...

Descripción completa

Detalles Bibliográficos
Autores principales:	Anantharaman, Karthik, Brown, Christopher T., Hug, Laura A., Sharon, Itai, Castelle, Cindy J., Probst, Alexander J., Thomas, Brian C., Singh, Andrea, Wilkins, Michael J., Karaoz, Ulas, Brodie, Eoin L., Williams, Kenneth H., Hubbard, Susan S., Banfield, Jillian F.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2016
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5079060/ https://www.ncbi.nlm.nih.gov/pubmed/27774985 http://dx.doi.org/10.1038/ncomms13219

Ejemplares similares

Metatranscriptomic Analysis Reveals Unexpectedly Diverse Microbial Metabolism in a Biogeochemical Hot Spot in an Alluvial Aquifer
por: Jewell, Talia N. M., et al.
Publicado: (2017)

Metatranscriptomic evidence of pervasive and diverse chemolithoautotrophy relevant to C, S, N and Fe cycling in a shallow alluvial aquifer
por: Jewell, Talia N M, et al.
Publicado: (2016)

Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment
por: Castelle, Cindy J., et al.
Publicado: (2013)

microTrait: A Toolset for a Trait-Based Representation of Microbial Genomes
por: Karaoz, Ulas, et al.
Publicado: (2022)

Paired RNA Radiocarbon and Sequencing Analyses Indicate the Importance of Autotrophy in a Shallow Alluvial Aquifer
por: Mailloux, Brian J., et al.
Publicado: (2019)

Analysis of five complete genome sequences for members of the class Peribacteria in the recently recognized Peregrinibacteria bacterial phylum
por: Anantharaman, Karthik, et al.
Publicado: (2016)

Solid and Suspension Microarrays for Microbial Diagnostics
por: Miller, Steve, et al.
Publicado: (2015)

Lipid analysis of CO(2)-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria
por: Probst, Alexander J., et al.
Publicado: (2020)

Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface
por: Probst, Alexander J., et al.
Publicado: (2018)

Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling
por: Tran, Patricia Q., et al.
Publicado: (2021)

Major bacterial lineages are essentially devoid of CRISPR-Cas viral defence systems
por: Burstein, David, et al.
Publicado: (2016)

Small Genomes and Sparse Metabolisms of Sediment-Associated Bacteria from Four Candidate Phyla
por: Kantor, Rose S., et al.
Publicado: (2013)

Effect of elevation, season and accelerated snowmelt on biogeochemical processes during isolated conifer needle litter decomposition
por: Leonard, Laura T., et al.
Publicado: (2021)

Impacts of microbial assemblage and environmental conditions on the distribution of anatoxin-a producing cyanobacteria within a river network
por: Bouma-Gregson, Keith, et al.
Publicado: (2019)

Genome resolved analysis of a premature infant gut microbial community reveals a Varibaculum cambriense genome and a shift towards fermentation-based metabolism during the third week of life
por: Brown, Christopher T, et al.
Publicado: (2013)

Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling
por: Hug, Laura A, et al.
Publicado: (2013)

A comparison of lodgepole and spruce needle chemistry impacts on terrestrial biogeochemical processes during isolated decomposition
por: Leonard, Laura T., et al.
Publicado: (2020)

A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae
por: Silva, Paulo César, et al.
Publicado: (2021)

Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria
por: Chase, Alexander B., et al.
Publicado: (2019)

METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks
por: Zhou, Zhichao, et al.
Publicado: (2022)

Bacteria increase arid-land soil surface temperature through the production of sunscreens
por: Couradeau, Estelle, et al.
Publicado: (2016)

Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits
por: Chase, Alexander B., et al.
Publicado: (2017)

Microbial Phosphorus Mobilization Strategies Across a Natural Nutrient Limitation Gradient and Evidence for Linkage With Iron Solubilization Traits
por: Wang, Shi, et al.
Publicado: (2021)

Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem
por: Coclet, Clement, et al.
Publicado: (2023)

Biogeochemical cycles and climate
por: Dolman, Han, et al.
Publicado: (2019)

Complete 4.55-Megabase-Pair Genome of “Candidatus Fluviicola riflensis,” Curated from Short-Read Metagenomic Sequences
por: Banfield, Jillian F., et al.
Publicado: (2017)

The Snowmelt Niche Differentiates Three Microbial Life Strategies That Influence Soil Nitrogen Availability During and After Winter
por: Sorensen, Patrick O., et al.
Publicado: (2020)

New CRISPR-Cas systems from uncultivated microbes
por: Burstein, David, et al.
Publicado: (2016)

The distinction of CPR bacteria from other bacteria based on protein family content
por: Méheust, Raphaël, et al.
Publicado: (2019)

Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika
por: Tran, Patricia Q., et al.
Publicado: (2021)

Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
por: Matheus Carnevali, Paula B., et al.
Publicado: (2021)

Large Blooms of Bacillales (Firmicutes) Underlie the Response to Wetting of Cyanobacterial Biocrusts at Various Stages of Maturity
por: Karaoz, Ulas, et al.
Publicado: (2018)

Accurate, multi-kb reads resolve complex populations and detect rare microorganisms
por: Sharon, Itai, et al.
Publicado: (2015)

Genome-Resolved Metagenomic Analysis Reveals Roles for Candidate Phyla and Other Microbial Community Members in Biogeochemical Transformations in Oil Reservoirs
por: Hu, Ping, et al.
Publicado: (2016)

RubisCO of a nucleoside pathway known from Archaea is found in diverse uncultivated phyla in bacteria
por: Wrighton, Kelly C, et al.
Publicado: (2016)

Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria
por: Matheus Carnevali, Paula B., et al.
Publicado: (2019)

Author Correction: Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria
por: Matheus Carnevali, Paula B., et al.
Publicado: (2019)

Conserved and lineage-specific hypothetical proteins may have played a central role in the rise and diversification of major archaeal groups
por: Méheust, Raphaël, et al.
Publicado: (2022)

Microbial Community Cohesion Mediates Community Turnover in Unperturbed Aquifers
por: Danczak, Robert E., et al.
Publicado: (2018)

Accurate and complete genomes from metagenomes
por: Chen, Lin-Xing, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_5cl9fttu7cih6adn13r36gk7t7