Cargando…

Genome-wide identification of endogenous RNA-directed DNA methylation loci associated with abundant 21-nucleotide siRNAs in Arabidopsis

In Arabidopsis, the 24-nucleotide (nt) small interfering RNAs (siRNAs) mediates RNA-directed DNA methylation (RdDM) and transcriptional gene silencing (TGS) of transposable elements (TEs). In the present study, we examined genome-wide changes in DNA methylation and siRNA accumulation in Arabidopsis...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhao, Jian-Hua, Fang, Yuan-Yuan, Duan, Cheng-Guo, Fang, Rong-Xiang, Ding, Shou-Wei, Guo, Hui-Shan
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2016
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5081565/ https://www.ncbi.nlm.nih.gov/pubmed/27786269 http://dx.doi.org/10.1038/srep36247

Ejemplares similares

Genome-wide analysis of single non-templated nucleotides in plant endogenous siRNAs and miRNAs
por: Wang, Feng, et al.
Publicado: (2016)

Genome-Wide Profiling and Analysis of Arabidopsis siRNAs
por: Kasschau, Kristin D, et al.
Publicado: (2007)

siRNAs compete with miRNAs for methylation by HEN1 in Arabidopsis
por: Yu, Bin, et al.
Publicado: (2010)

The Role of the Arabidopsis Exosome in siRNA–Independent Silencing of Heterochromatic Loci
por: Shin, Jun-Hye, et al.
Publicado: (2013)

Identification and characterization of microRNAs and endogenous siRNAs in Schistosoma japonicum
por: Hao, Lili, et al.
Publicado: (2010)

Genome-wide redistribution of 24-nt siRNAs in rice gametes
por: Li, Chenxin, et al.
Publicado: (2020)

Several phased siRNA annotation methods can frequently misidentify 24 nucleotide siRNA‐dominated PHAS loci
por: Polydore, Seth, et al.
Publicado: (2018)

Noncanonical MicroRNAs and Endogenous siRNAs in Lytic Infection of Murine Gammaherpesvirus
por: Xia, Jing, et al.
Publicado: (2012)

Genome-wide screens for effective siRNAs through assessing the size of siRNA effects
por: Zhang, Xiaohua Douglas
Publicado: (2008)

Biogenesis of phased siRNAs on membrane-bound polysomes in Arabidopsis
por: Li, Shengben, et al.
Publicado: (2016)

Essential Role for Endogenous siRNAs during Meiosis in Mouse Oocytes
por: Stein, Paula, et al.
Publicado: (2015)

miRNAs trigger widespread epigenetically-activated siRNAs from transposons in Arabidopsis
por: Creasey, K.M., et al.
Publicado: (2014)

Correction: Essential Role for Endogenous siRNAs during Meiosis in Mouse Oocytes
Publicado: (2015)

Stress-induced endogenous siRNAs targeting regulatory intron sequences in Brachypodium
por: Wang, Hsiao-Lin V., et al.
Publicado: (2015)

Endogenous siRNAs promote proteostasis and longevity in germline-less Caenorhabditis elegans
por: Cohen-Berkman, Moran, et al.
Publicado: (2020)

Extensive profiling in Arabidopsis reveals abundant polysome-associated 24-nt small RNAs including AGO5-dependent pseudogene-derived siRNAs
por: Marchais, Antonin, et al.
Publicado: (2019)

Targeted delivery of anti-coxsackievirus siRNAs using ligand-conjugated packaging RNAs
por: Zhang, Huifang M., et al.
Publicado: (2009)

The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
por: Castellano, Leandro, et al.
Publicado: (2015)

Where should siRNAs go: applicable organs for siRNA drugs
por: Ahn, Insook, et al.
Publicado: (2023)

PRL1, an RNA-Binding Protein, Positively Regulates the Accumulation of miRNAs and siRNAs in Arabidopsis
por: Zhang, Shuxin, et al.
Publicado: (2014)

siRNA–Mediated Methylation of Arabidopsis Telomeres
por: Vrbsky, Jan, et al.
Publicado: (2010)

Chimeric siRNAs with chemically modified pentofuranose and hexopyranose nucleotides: altritol-nucleotide (ANA) containing GalNAc–siRNA conjugates: in vitro and in vivo RNAi activity and resistance to 5′-exonuclease
por: Kumar, Pawan, et al.
Publicado: (2020)

A Pre-mRNA–Associating Factor Links Endogenous siRNAs to Chromatin Regulation
por: Burkhart, Kirk B., et al.
Publicado: (2011)

Knocking down Disease with siRNAs
por: Dykxhoorn, Derek M., et al.
Publicado: (2006)

Identification of ta-siRNAs and Cis-nat-siRNAs in Cassava and Their Roles in Response to Cassava Bacterial Blight
por: Quintero, Andrés, et al.
Publicado: (2013)

Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function
por: Zhang, Xiaoming, et al.
Publicado: (2012)

Endogenous siRNAs and piRNAs derived from transposable elements and genes in the malaria vector mosquito Anopheles gambiae
por: Biryukova, Inna, et al.
Publicado: (2015)

Utility of MicroRNAs and siRNAs in Cervical Carcinogenesis
por: Díaz-González, Sacnite del Mar, et al.
Publicado: (2015)

The roles of microRNAs and siRNAs in mammalian spermatogenesis
por: Hilz, Stephanie, et al.
Publicado: (2016)

Genome-wide profiling of sRNAs in the Verticillium dahliae-infected Arabidopsis roots
por: Jin, Yun, et al.
Publicado: (2018)

Designing Ago2-specific siRNA/shRNA to Avoid Competition with Endogenous miRNAs
por: Ma, Hongming, et al.
Publicado: (2014)

RNAi‐mediated endogene silencing in strawberry fruit: detection of primary and secondary siRNAs by deep sequencing
por: Härtl, Katja, et al.
Publicado: (2017)

Topically delivered 22 nt siRNAs enhance RNAi silencing of endogenous genes in two species
por: Hendrix, Bill, et al.
Publicado: (2021)

An Attempt to Detect siRNA-Mediated Genomic DNA Modification by Artificially Induced Mismatch siRNA in Arabidopsis
por: Miyagawa, Yosuke, et al.
Publicado: (2013)

siRNA potency enhancement via chemical modifications of nucleotide bases at the 5′-end of the siRNA guide strand
por: Shinohara, Fumikazu, et al.
Publicado: (2021)

Analysis of siRNA specificity on targets with double-nucleotide mismatches
por: Dahlgren, Cecilia, et al.
Publicado: (2008)

Structural and Functional Analysis of Viral siRNAs
por: Szittya, Gyorgy, et al.
Publicado: (2010)

Progress towards in Vivo Use of siRNAs
por: Behlke, Mark A.
Publicado: (2006)

The master role of siRNAs in plant immunity
por: Kong, Xiuzhen, et al.
Publicado: (2022)

Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
por: Castellano, Leandro, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_o1g063dl03nt0r5kh9f7psqrtv