Cargando…
The association of six non‐synonymous variants in three DNA repair genes with hepatocellular carcinoma risk: a meta‐analysis
Hepatocellular carcinoma is a complex polygenic disease. Despite the huge advances in genetic epidemiology, it still remains a challenge to unveil the genetic architecture of hepatocellular carcinoma. We, therefore, decided to meta‐analytically assess the association of six non‐synonymous coding var...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5082408/ https://www.ncbi.nlm.nih.gov/pubmed/27306318 http://dx.doi.org/10.1111/jcmm.12896 |
_version_ | 1782463052501745664 |
---|---|
author | Shi, Yan‐Hui Wang, Bin Xu, Bai‐Ping Jiang, Dan‐Na Zhao, Dong‐Mei Ji, Man‐Ru Zhou, Li Li, Xue Lu, Chang‐Zhu |
author_facet | Shi, Yan‐Hui Wang, Bin Xu, Bai‐Ping Jiang, Dan‐Na Zhao, Dong‐Mei Ji, Man‐Ru Zhou, Li Li, Xue Lu, Chang‐Zhu |
author_sort | Shi, Yan‐Hui |
collection | PubMed |
description | Hepatocellular carcinoma is a complex polygenic disease. Despite the huge advances in genetic epidemiology, it still remains a challenge to unveil the genetic architecture of hepatocellular carcinoma. We, therefore, decided to meta‐analytically assess the association of six non‐synonymous coding variants from XRCC1,XRCC3 and XPD genes with hepatocellular carcinoma risk by pooling the results of 20 English articles. This meta‐analysis was conducted according to the PRISMA statement, and data collection was independently completed in duplicate. In overall analyses, the minor alleles of four variants, Arg280His (odds ratio, 95% confidence interval, P: 1.37, 1.13–1.66, 0.001), Thr241Met (1.93, 1.17–3.20, 0.011), Asp312Asn (1.22, 1.08–1.38, 0.001) and Lys751Gln (1.42, 1.02–1.97, 0.038), were associated with the significant risk for hepatocellular carcinoma. There were low probabilities of publication bias for all variants. Subgroup analyses revealed significant association of XRCC1 gene Arg399Gln with hepatocellular carcinoma in Chinese especially from south China (odds ratio, 95% confidence interval, P: 1.57, 1.16–2.14, 0.004), in larger studies (1.48, 1.11–1.98, 0.007) and in studies with population‐based controls (1.33, 1.06–1.68, 0.016). Taken together, our findings demonstrated that XPD gene Asp312Asn and XRCC1 gene Arg399Gln might be candidate susceptibility loci for hepatocellular carcinoma. Considering the ubiquity of genetic heterogeneity, further validation in a broad range of ethnic populations is warranted. |
format | Online Article Text |
id | pubmed-5082408 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-50824082016-11-01 The association of six non‐synonymous variants in three DNA repair genes with hepatocellular carcinoma risk: a meta‐analysis Shi, Yan‐Hui Wang, Bin Xu, Bai‐Ping Jiang, Dan‐Na Zhao, Dong‐Mei Ji, Man‐Ru Zhou, Li Li, Xue Lu, Chang‐Zhu J Cell Mol Med Original Articles Hepatocellular carcinoma is a complex polygenic disease. Despite the huge advances in genetic epidemiology, it still remains a challenge to unveil the genetic architecture of hepatocellular carcinoma. We, therefore, decided to meta‐analytically assess the association of six non‐synonymous coding variants from XRCC1,XRCC3 and XPD genes with hepatocellular carcinoma risk by pooling the results of 20 English articles. This meta‐analysis was conducted according to the PRISMA statement, and data collection was independently completed in duplicate. In overall analyses, the minor alleles of four variants, Arg280His (odds ratio, 95% confidence interval, P: 1.37, 1.13–1.66, 0.001), Thr241Met (1.93, 1.17–3.20, 0.011), Asp312Asn (1.22, 1.08–1.38, 0.001) and Lys751Gln (1.42, 1.02–1.97, 0.038), were associated with the significant risk for hepatocellular carcinoma. There were low probabilities of publication bias for all variants. Subgroup analyses revealed significant association of XRCC1 gene Arg399Gln with hepatocellular carcinoma in Chinese especially from south China (odds ratio, 95% confidence interval, P: 1.57, 1.16–2.14, 0.004), in larger studies (1.48, 1.11–1.98, 0.007) and in studies with population‐based controls (1.33, 1.06–1.68, 0.016). Taken together, our findings demonstrated that XPD gene Asp312Asn and XRCC1 gene Arg399Gln might be candidate susceptibility loci for hepatocellular carcinoma. Considering the ubiquity of genetic heterogeneity, further validation in a broad range of ethnic populations is warranted. John Wiley and Sons Inc. 2016-06-16 2016-11 /pmc/articles/PMC5082408/ /pubmed/27306318 http://dx.doi.org/10.1111/jcmm.12896 Text en © 2016 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Shi, Yan‐Hui Wang, Bin Xu, Bai‐Ping Jiang, Dan‐Na Zhao, Dong‐Mei Ji, Man‐Ru Zhou, Li Li, Xue Lu, Chang‐Zhu The association of six non‐synonymous variants in three DNA repair genes with hepatocellular carcinoma risk: a meta‐analysis |
title | The association of six non‐synonymous variants in three DNA repair genes with hepatocellular carcinoma risk: a meta‐analysis |
title_full | The association of six non‐synonymous variants in three DNA repair genes with hepatocellular carcinoma risk: a meta‐analysis |
title_fullStr | The association of six non‐synonymous variants in three DNA repair genes with hepatocellular carcinoma risk: a meta‐analysis |
title_full_unstemmed | The association of six non‐synonymous variants in three DNA repair genes with hepatocellular carcinoma risk: a meta‐analysis |
title_short | The association of six non‐synonymous variants in three DNA repair genes with hepatocellular carcinoma risk: a meta‐analysis |
title_sort | association of six non‐synonymous variants in three dna repair genes with hepatocellular carcinoma risk: a meta‐analysis |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5082408/ https://www.ncbi.nlm.nih.gov/pubmed/27306318 http://dx.doi.org/10.1111/jcmm.12896 |
work_keys_str_mv | AT shiyanhui theassociationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT wangbin theassociationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT xubaiping theassociationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT jiangdanna theassociationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT zhaodongmei theassociationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT jimanru theassociationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT zhouli theassociationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT lixue theassociationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT luchangzhu theassociationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT shiyanhui associationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT wangbin associationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT xubaiping associationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT jiangdanna associationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT zhaodongmei associationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT jimanru associationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT zhouli associationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT lixue associationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis AT luchangzhu associationofsixnonsynonymousvariantsinthreednarepairgeneswithhepatocellularcarcinomariskametaanalysis |