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Storage Time and Urine Biomarker Levels in the ASSESS-AKI Study
BACKGROUND: Although stored urine samples are often used in biomarker studies focused on acute and chronic kidney disease, how storage time impacts biomarker levels is not well understood. METHODS: 866 subjects enrolled in the NIDDK-sponsored ASsessment, Serial Evaluation, and Subsequent Sequelae in...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5082822/ https://www.ncbi.nlm.nih.gov/pubmed/27788160 http://dx.doi.org/10.1371/journal.pone.0164832 |
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author | Liu, Kathleen D. Siew, Edward D. Reeves, W. Brian Himmelfarb, Jonathan Go, Alan S. Hsu, Chi-yuan Bennett, Michael R. Devarajan, Prasad Ikizler, T. Alp Kaufman, James S. Kimmel, Paul L. Chinchilli, Vernon M. Parikh, Chirag R. |
author_facet | Liu, Kathleen D. Siew, Edward D. Reeves, W. Brian Himmelfarb, Jonathan Go, Alan S. Hsu, Chi-yuan Bennett, Michael R. Devarajan, Prasad Ikizler, T. Alp Kaufman, James S. Kimmel, Paul L. Chinchilli, Vernon M. Parikh, Chirag R. |
author_sort | Liu, Kathleen D. |
collection | PubMed |
description | BACKGROUND: Although stored urine samples are often used in biomarker studies focused on acute and chronic kidney disease, how storage time impacts biomarker levels is not well understood. METHODS: 866 subjects enrolled in the NIDDK-sponsored ASsessment, Serial Evaluation, and Subsequent Sequelae in Acute Kidney Injury (ASSESS-AKI) Study were included. Samples were processed under standard conditions and stored at -70°C until analyzed. Kidney injury molecule-1 (KIM-1), neutrophil gelatinase-associated lipocalin (NGAL), interleukin-18 (IL-18), and liver fatty acid binding protein (L-FABP) were measured in urine samples collected during the index hospitalization or an outpatient visit 3 months later. Mixed effects models were used to determine the effect of storage time on biomarker levels and stratified by visit. RESULTS: Median storage was 17.8 months (25–75% IQR 10.6–23.7) for samples from the index hospitalization and 14.6 months (IQR 7.3–20.4) for outpatient samples. In the mixed effects models, the only significant association between storage time and biomarker concentration was for KIM-1 in outpatient samples, where each month of storage was associated with a 1.7% decrease (95% CI -3% to -0.3%). There was no relationship between storage time and KIM-1 levels in samples from the index hospitalization. CONCLUSION: There was no significant impact of storage time over a median of 18 months on urine KIM-1, NGAL, IL-18 or L-FABP in hospitalized samples; a statistically significant effect towards a decrease over time was noted for KIM-1 in outpatient samples. Additional studies are needed to determine whether longer periods of storage at -70°C systematically impact levels of these analytes. |
format | Online Article Text |
id | pubmed-5082822 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-50828222016-11-04 Storage Time and Urine Biomarker Levels in the ASSESS-AKI Study Liu, Kathleen D. Siew, Edward D. Reeves, W. Brian Himmelfarb, Jonathan Go, Alan S. Hsu, Chi-yuan Bennett, Michael R. Devarajan, Prasad Ikizler, T. Alp Kaufman, James S. Kimmel, Paul L. Chinchilli, Vernon M. Parikh, Chirag R. PLoS One Research Article BACKGROUND: Although stored urine samples are often used in biomarker studies focused on acute and chronic kidney disease, how storage time impacts biomarker levels is not well understood. METHODS: 866 subjects enrolled in the NIDDK-sponsored ASsessment, Serial Evaluation, and Subsequent Sequelae in Acute Kidney Injury (ASSESS-AKI) Study were included. Samples were processed under standard conditions and stored at -70°C until analyzed. Kidney injury molecule-1 (KIM-1), neutrophil gelatinase-associated lipocalin (NGAL), interleukin-18 (IL-18), and liver fatty acid binding protein (L-FABP) were measured in urine samples collected during the index hospitalization or an outpatient visit 3 months later. Mixed effects models were used to determine the effect of storage time on biomarker levels and stratified by visit. RESULTS: Median storage was 17.8 months (25–75% IQR 10.6–23.7) for samples from the index hospitalization and 14.6 months (IQR 7.3–20.4) for outpatient samples. In the mixed effects models, the only significant association between storage time and biomarker concentration was for KIM-1 in outpatient samples, where each month of storage was associated with a 1.7% decrease (95% CI -3% to -0.3%). There was no relationship between storage time and KIM-1 levels in samples from the index hospitalization. CONCLUSION: There was no significant impact of storage time over a median of 18 months on urine KIM-1, NGAL, IL-18 or L-FABP in hospitalized samples; a statistically significant effect towards a decrease over time was noted for KIM-1 in outpatient samples. Additional studies are needed to determine whether longer periods of storage at -70°C systematically impact levels of these analytes. Public Library of Science 2016-10-27 /pmc/articles/PMC5082822/ /pubmed/27788160 http://dx.doi.org/10.1371/journal.pone.0164832 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Research Article Liu, Kathleen D. Siew, Edward D. Reeves, W. Brian Himmelfarb, Jonathan Go, Alan S. Hsu, Chi-yuan Bennett, Michael R. Devarajan, Prasad Ikizler, T. Alp Kaufman, James S. Kimmel, Paul L. Chinchilli, Vernon M. Parikh, Chirag R. Storage Time and Urine Biomarker Levels in the ASSESS-AKI Study |
title | Storage Time and Urine Biomarker Levels in the ASSESS-AKI Study |
title_full | Storage Time and Urine Biomarker Levels in the ASSESS-AKI Study |
title_fullStr | Storage Time and Urine Biomarker Levels in the ASSESS-AKI Study |
title_full_unstemmed | Storage Time and Urine Biomarker Levels in the ASSESS-AKI Study |
title_short | Storage Time and Urine Biomarker Levels in the ASSESS-AKI Study |
title_sort | storage time and urine biomarker levels in the assess-aki study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5082822/ https://www.ncbi.nlm.nih.gov/pubmed/27788160 http://dx.doi.org/10.1371/journal.pone.0164832 |
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