Cargando…
Antagonistic autoregulation speeds up a homogeneous response in Escherichia coli
By integrating positive and negative feedback loops, biological systems establish intricate gene expression patterns linked to multistability, pulsing, and oscillations. This depends on the specific characteristics of each interlinked feedback, and thus one would expect additional expression program...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5086920/ https://www.ncbi.nlm.nih.gov/pubmed/27796341 http://dx.doi.org/10.1038/srep36196 |
_version_ | 1782463832641241088 |
---|---|
author | Rodrigo, Guillermo Bajic, Djordje Elola, Ignacio Poyatos, Juan F. |
author_facet | Rodrigo, Guillermo Bajic, Djordje Elola, Ignacio Poyatos, Juan F. |
author_sort | Rodrigo, Guillermo |
collection | PubMed |
description | By integrating positive and negative feedback loops, biological systems establish intricate gene expression patterns linked to multistability, pulsing, and oscillations. This depends on the specific characteristics of each interlinked feedback, and thus one would expect additional expression programs to be found. Here, we investigate one such program associated with an antagonistic positive and negative transcriptional autoregulatory motif derived from the multiple antibiotic resistance (mar) system of Escherichia coli. We studied the dynamics of the system by combining a predictive mathematical model with high-resolution experimental measures of the response both at the population and single-cell level. We show that in this motif the weak positive autoregulation does not slow down but rather enhances response speedup in combination with a strong negative feedback loop. This balance of feedback strengths anticipates a homogeneous population phenotype, which we corroborate experimentally. Theoretical analysis also emphasized the specific molecular properties that determine the dynamics of the mar phenotype. More broadly, response acceleration could provide a rationale for the presence of weak positive feedbacks in other biological scenarios exhibiting these interlinked regulatory architectures. |
format | Online Article Text |
id | pubmed-5086920 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50869202016-11-04 Antagonistic autoregulation speeds up a homogeneous response in Escherichia coli Rodrigo, Guillermo Bajic, Djordje Elola, Ignacio Poyatos, Juan F. Sci Rep Article By integrating positive and negative feedback loops, biological systems establish intricate gene expression patterns linked to multistability, pulsing, and oscillations. This depends on the specific characteristics of each interlinked feedback, and thus one would expect additional expression programs to be found. Here, we investigate one such program associated with an antagonistic positive and negative transcriptional autoregulatory motif derived from the multiple antibiotic resistance (mar) system of Escherichia coli. We studied the dynamics of the system by combining a predictive mathematical model with high-resolution experimental measures of the response both at the population and single-cell level. We show that in this motif the weak positive autoregulation does not slow down but rather enhances response speedup in combination with a strong negative feedback loop. This balance of feedback strengths anticipates a homogeneous population phenotype, which we corroborate experimentally. Theoretical analysis also emphasized the specific molecular properties that determine the dynamics of the mar phenotype. More broadly, response acceleration could provide a rationale for the presence of weak positive feedbacks in other biological scenarios exhibiting these interlinked regulatory architectures. Nature Publishing Group 2016-10-31 /pmc/articles/PMC5086920/ /pubmed/27796341 http://dx.doi.org/10.1038/srep36196 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Rodrigo, Guillermo Bajic, Djordje Elola, Ignacio Poyatos, Juan F. Antagonistic autoregulation speeds up a homogeneous response in Escherichia coli |
title | Antagonistic autoregulation speeds up a homogeneous response in Escherichia coli |
title_full | Antagonistic autoregulation speeds up a homogeneous response in Escherichia coli |
title_fullStr | Antagonistic autoregulation speeds up a homogeneous response in Escherichia coli |
title_full_unstemmed | Antagonistic autoregulation speeds up a homogeneous response in Escherichia coli |
title_short | Antagonistic autoregulation speeds up a homogeneous response in Escherichia coli |
title_sort | antagonistic autoregulation speeds up a homogeneous response in escherichia coli |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5086920/ https://www.ncbi.nlm.nih.gov/pubmed/27796341 http://dx.doi.org/10.1038/srep36196 |
work_keys_str_mv | AT rodrigoguillermo antagonisticautoregulationspeedsupahomogeneousresponseinescherichiacoli AT bajicdjordje antagonisticautoregulationspeedsupahomogeneousresponseinescherichiacoli AT elolaignacio antagonisticautoregulationspeedsupahomogeneousresponseinescherichiacoli AT poyatosjuanf antagonisticautoregulationspeedsupahomogeneousresponseinescherichiacoli |