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Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP

Recent studies illustrate that short oligonucleotide sequences can be easily produced from nucleotide precursors in a template-free non-enzymatic way under dehydrating conditions, i.e. using essentially dry materials. Here we report that 3’,5’ cyclic AMP may also serve as a substrate of the reaction...

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Autores principales: Costanzo, Giovanna, Pino, Samanta, Timperio, Anna Maria, Šponer, Judit E., Šponer, Jiří, Nováková, Olga, Šedo, Ondrej, Zdráhal, Zbyněk, Di Mauro, Ernesto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5089550/
https://www.ncbi.nlm.nih.gov/pubmed/27802310
http://dx.doi.org/10.1371/journal.pone.0165723
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author Costanzo, Giovanna
Pino, Samanta
Timperio, Anna Maria
Šponer, Judit E.
Šponer, Jiří
Nováková, Olga
Šedo, Ondrej
Zdráhal, Zbyněk
Di Mauro, Ernesto
author_facet Costanzo, Giovanna
Pino, Samanta
Timperio, Anna Maria
Šponer, Judit E.
Šponer, Jiří
Nováková, Olga
Šedo, Ondrej
Zdráhal, Zbyněk
Di Mauro, Ernesto
author_sort Costanzo, Giovanna
collection PubMed
description Recent studies illustrate that short oligonucleotide sequences can be easily produced from nucleotide precursors in a template-free non-enzymatic way under dehydrating conditions, i.e. using essentially dry materials. Here we report that 3’,5’ cyclic AMP may also serve as a substrate of the reaction, which proceeds under moderate conditions yet with a lower efficiency than the previously reported oligomerization of 3’,5’ cyclic GMP. Optimally the oligomerization requires (i) a temperature of 80°C, (ii) a neutral to alkaline environment and (iii) a time on the order of weeks. Differences in the yield and required reaction conditions of the oligomerizations utilizing 3’,5’ cGMP and cAMP are discussed in terms of the crystal structures of the compounds. Polymerization of 3’,5’ cyclic nucleotides, whose paramount relevance in a prebiotic chemistry context has been widely accepted for decades, supports the possibility that the origin of extant genetic materials might have followed a direct uninterrupted path since its very beginning, starting from non-elaborately pre-activated monomer compounds and simple reactions.
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spelling pubmed-50895502016-11-15 Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP Costanzo, Giovanna Pino, Samanta Timperio, Anna Maria Šponer, Judit E. Šponer, Jiří Nováková, Olga Šedo, Ondrej Zdráhal, Zbyněk Di Mauro, Ernesto PLoS One Research Article Recent studies illustrate that short oligonucleotide sequences can be easily produced from nucleotide precursors in a template-free non-enzymatic way under dehydrating conditions, i.e. using essentially dry materials. Here we report that 3’,5’ cyclic AMP may also serve as a substrate of the reaction, which proceeds under moderate conditions yet with a lower efficiency than the previously reported oligomerization of 3’,5’ cyclic GMP. Optimally the oligomerization requires (i) a temperature of 80°C, (ii) a neutral to alkaline environment and (iii) a time on the order of weeks. Differences in the yield and required reaction conditions of the oligomerizations utilizing 3’,5’ cGMP and cAMP are discussed in terms of the crystal structures of the compounds. Polymerization of 3’,5’ cyclic nucleotides, whose paramount relevance in a prebiotic chemistry context has been widely accepted for decades, supports the possibility that the origin of extant genetic materials might have followed a direct uninterrupted path since its very beginning, starting from non-elaborately pre-activated monomer compounds and simple reactions. Public Library of Science 2016-11-01 /pmc/articles/PMC5089550/ /pubmed/27802310 http://dx.doi.org/10.1371/journal.pone.0165723 Text en © 2016 Costanzo et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Costanzo, Giovanna
Pino, Samanta
Timperio, Anna Maria
Šponer, Judit E.
Šponer, Jiří
Nováková, Olga
Šedo, Ondrej
Zdráhal, Zbyněk
Di Mauro, Ernesto
Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP
title Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP
title_full Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP
title_fullStr Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP
title_full_unstemmed Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP
title_short Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP
title_sort non-enzymatic oligomerization of 3’, 5’ cyclic amp
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5089550/
https://www.ncbi.nlm.nih.gov/pubmed/27802310
http://dx.doi.org/10.1371/journal.pone.0165723
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