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Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP
Recent studies illustrate that short oligonucleotide sequences can be easily produced from nucleotide precursors in a template-free non-enzymatic way under dehydrating conditions, i.e. using essentially dry materials. Here we report that 3’,5’ cyclic AMP may also serve as a substrate of the reaction...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5089550/ https://www.ncbi.nlm.nih.gov/pubmed/27802310 http://dx.doi.org/10.1371/journal.pone.0165723 |
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author | Costanzo, Giovanna Pino, Samanta Timperio, Anna Maria Šponer, Judit E. Šponer, Jiří Nováková, Olga Šedo, Ondrej Zdráhal, Zbyněk Di Mauro, Ernesto |
author_facet | Costanzo, Giovanna Pino, Samanta Timperio, Anna Maria Šponer, Judit E. Šponer, Jiří Nováková, Olga Šedo, Ondrej Zdráhal, Zbyněk Di Mauro, Ernesto |
author_sort | Costanzo, Giovanna |
collection | PubMed |
description | Recent studies illustrate that short oligonucleotide sequences can be easily produced from nucleotide precursors in a template-free non-enzymatic way under dehydrating conditions, i.e. using essentially dry materials. Here we report that 3’,5’ cyclic AMP may also serve as a substrate of the reaction, which proceeds under moderate conditions yet with a lower efficiency than the previously reported oligomerization of 3’,5’ cyclic GMP. Optimally the oligomerization requires (i) a temperature of 80°C, (ii) a neutral to alkaline environment and (iii) a time on the order of weeks. Differences in the yield and required reaction conditions of the oligomerizations utilizing 3’,5’ cGMP and cAMP are discussed in terms of the crystal structures of the compounds. Polymerization of 3’,5’ cyclic nucleotides, whose paramount relevance in a prebiotic chemistry context has been widely accepted for decades, supports the possibility that the origin of extant genetic materials might have followed a direct uninterrupted path since its very beginning, starting from non-elaborately pre-activated monomer compounds and simple reactions. |
format | Online Article Text |
id | pubmed-5089550 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-50895502016-11-15 Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP Costanzo, Giovanna Pino, Samanta Timperio, Anna Maria Šponer, Judit E. Šponer, Jiří Nováková, Olga Šedo, Ondrej Zdráhal, Zbyněk Di Mauro, Ernesto PLoS One Research Article Recent studies illustrate that short oligonucleotide sequences can be easily produced from nucleotide precursors in a template-free non-enzymatic way under dehydrating conditions, i.e. using essentially dry materials. Here we report that 3’,5’ cyclic AMP may also serve as a substrate of the reaction, which proceeds under moderate conditions yet with a lower efficiency than the previously reported oligomerization of 3’,5’ cyclic GMP. Optimally the oligomerization requires (i) a temperature of 80°C, (ii) a neutral to alkaline environment and (iii) a time on the order of weeks. Differences in the yield and required reaction conditions of the oligomerizations utilizing 3’,5’ cGMP and cAMP are discussed in terms of the crystal structures of the compounds. Polymerization of 3’,5’ cyclic nucleotides, whose paramount relevance in a prebiotic chemistry context has been widely accepted for decades, supports the possibility that the origin of extant genetic materials might have followed a direct uninterrupted path since its very beginning, starting from non-elaborately pre-activated monomer compounds and simple reactions. Public Library of Science 2016-11-01 /pmc/articles/PMC5089550/ /pubmed/27802310 http://dx.doi.org/10.1371/journal.pone.0165723 Text en © 2016 Costanzo et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Costanzo, Giovanna Pino, Samanta Timperio, Anna Maria Šponer, Judit E. Šponer, Jiří Nováková, Olga Šedo, Ondrej Zdráhal, Zbyněk Di Mauro, Ernesto Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP |
title | Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP |
title_full | Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP |
title_fullStr | Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP |
title_full_unstemmed | Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP |
title_short | Non-Enzymatic Oligomerization of 3’, 5’ Cyclic AMP |
title_sort | non-enzymatic oligomerization of 3’, 5’ cyclic amp |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5089550/ https://www.ncbi.nlm.nih.gov/pubmed/27802310 http://dx.doi.org/10.1371/journal.pone.0165723 |
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