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Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus
The edible sea urchin Loxechinus albus (Molina, 1782) is a keystone species in the littoral benthic systems of the Pacific coast of South America. The international demand for high-quality gonads of this echinoderm has led to an extensive exploitation and decline of its natural populations. Conseque...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5090362/ https://www.ncbi.nlm.nih.gov/pubmed/27805042 http://dx.doi.org/10.1038/srep36516 |
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author | Gaitán-Espitia, Juan Diego Sánchez, Roland Bruning, Paulina Cárdenas, Leyla |
author_facet | Gaitán-Espitia, Juan Diego Sánchez, Roland Bruning, Paulina Cárdenas, Leyla |
author_sort | Gaitán-Espitia, Juan Diego |
collection | PubMed |
description | The edible sea urchin Loxechinus albus (Molina, 1782) is a keystone species in the littoral benthic systems of the Pacific coast of South America. The international demand for high-quality gonads of this echinoderm has led to an extensive exploitation and decline of its natural populations. Consequently, a more thorough understanding of L. albus gonad development and gametogenesis could provide valuable resources for aquaculture applications, management, conservation and studies about the evolution of functional and structural pathways that underlie the reproductive toolkit of marine invertebrates. Using a high-throughput sequencing technology, we explored the male gonad transcriptome of this highly fecund sea urchin. Through a de novo assembly approach we obtained 42,530 transcripts of which 15,544 (36.6%) had significant alignments to known proteins in public databases. From these transcripts, approximately 73% were functionally annotated allowing the identification of several candidate genes that are likely to play a central role in developmental processes, nutrient reservoir activity, sexual reproduction, gamete generation, meiosis, sex differentiation, sperm motility, male courtship behavior and fertilization. Additionally, comparisons with the male gonad transcriptomes of other echinoderms revealed several conserved orthologous genes, suggesting that similar functional and structural pathways underlie the reproductive development in this group and other marine invertebrates. |
format | Online Article Text |
id | pubmed-5090362 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50903622016-11-08 Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus Gaitán-Espitia, Juan Diego Sánchez, Roland Bruning, Paulina Cárdenas, Leyla Sci Rep Article The edible sea urchin Loxechinus albus (Molina, 1782) is a keystone species in the littoral benthic systems of the Pacific coast of South America. The international demand for high-quality gonads of this echinoderm has led to an extensive exploitation and decline of its natural populations. Consequently, a more thorough understanding of L. albus gonad development and gametogenesis could provide valuable resources for aquaculture applications, management, conservation and studies about the evolution of functional and structural pathways that underlie the reproductive toolkit of marine invertebrates. Using a high-throughput sequencing technology, we explored the male gonad transcriptome of this highly fecund sea urchin. Through a de novo assembly approach we obtained 42,530 transcripts of which 15,544 (36.6%) had significant alignments to known proteins in public databases. From these transcripts, approximately 73% were functionally annotated allowing the identification of several candidate genes that are likely to play a central role in developmental processes, nutrient reservoir activity, sexual reproduction, gamete generation, meiosis, sex differentiation, sperm motility, male courtship behavior and fertilization. Additionally, comparisons with the male gonad transcriptomes of other echinoderms revealed several conserved orthologous genes, suggesting that similar functional and structural pathways underlie the reproductive development in this group and other marine invertebrates. Nature Publishing Group 2016-11-02 /pmc/articles/PMC5090362/ /pubmed/27805042 http://dx.doi.org/10.1038/srep36516 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Gaitán-Espitia, Juan Diego Sánchez, Roland Bruning, Paulina Cárdenas, Leyla Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus |
title | Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus |
title_full | Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus |
title_fullStr | Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus |
title_full_unstemmed | Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus |
title_short | Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus |
title_sort | functional insights into the testis transcriptome of the edible sea urchin loxechinus albus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5090362/ https://www.ncbi.nlm.nih.gov/pubmed/27805042 http://dx.doi.org/10.1038/srep36516 |
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