Cargando…

Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus

The edible sea urchin Loxechinus albus (Molina, 1782) is a keystone species in the littoral benthic systems of the Pacific coast of South America. The international demand for high-quality gonads of this echinoderm has led to an extensive exploitation and decline of its natural populations. Conseque...

Descripción completa

Detalles Bibliográficos
Autores principales: Gaitán-Espitia, Juan Diego, Sánchez, Roland, Bruning, Paulina, Cárdenas, Leyla
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5090362/
https://www.ncbi.nlm.nih.gov/pubmed/27805042
http://dx.doi.org/10.1038/srep36516
_version_ 1782464391791247360
author Gaitán-Espitia, Juan Diego
Sánchez, Roland
Bruning, Paulina
Cárdenas, Leyla
author_facet Gaitán-Espitia, Juan Diego
Sánchez, Roland
Bruning, Paulina
Cárdenas, Leyla
author_sort Gaitán-Espitia, Juan Diego
collection PubMed
description The edible sea urchin Loxechinus albus (Molina, 1782) is a keystone species in the littoral benthic systems of the Pacific coast of South America. The international demand for high-quality gonads of this echinoderm has led to an extensive exploitation and decline of its natural populations. Consequently, a more thorough understanding of L. albus gonad development and gametogenesis could provide valuable resources for aquaculture applications, management, conservation and studies about the evolution of functional and structural pathways that underlie the reproductive toolkit of marine invertebrates. Using a high-throughput sequencing technology, we explored the male gonad transcriptome of this highly fecund sea urchin. Through a de novo assembly approach we obtained 42,530 transcripts of which 15,544 (36.6%) had significant alignments to known proteins in public databases. From these transcripts, approximately 73% were functionally annotated allowing the identification of several candidate genes that are likely to play a central role in developmental processes, nutrient reservoir activity, sexual reproduction, gamete generation, meiosis, sex differentiation, sperm motility, male courtship behavior and fertilization. Additionally, comparisons with the male gonad transcriptomes of other echinoderms revealed several conserved orthologous genes, suggesting that similar functional and structural pathways underlie the reproductive development in this group and other marine invertebrates.
format Online
Article
Text
id pubmed-5090362
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-50903622016-11-08 Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus Gaitán-Espitia, Juan Diego Sánchez, Roland Bruning, Paulina Cárdenas, Leyla Sci Rep Article The edible sea urchin Loxechinus albus (Molina, 1782) is a keystone species in the littoral benthic systems of the Pacific coast of South America. The international demand for high-quality gonads of this echinoderm has led to an extensive exploitation and decline of its natural populations. Consequently, a more thorough understanding of L. albus gonad development and gametogenesis could provide valuable resources for aquaculture applications, management, conservation and studies about the evolution of functional and structural pathways that underlie the reproductive toolkit of marine invertebrates. Using a high-throughput sequencing technology, we explored the male gonad transcriptome of this highly fecund sea urchin. Through a de novo assembly approach we obtained 42,530 transcripts of which 15,544 (36.6%) had significant alignments to known proteins in public databases. From these transcripts, approximately 73% were functionally annotated allowing the identification of several candidate genes that are likely to play a central role in developmental processes, nutrient reservoir activity, sexual reproduction, gamete generation, meiosis, sex differentiation, sperm motility, male courtship behavior and fertilization. Additionally, comparisons with the male gonad transcriptomes of other echinoderms revealed several conserved orthologous genes, suggesting that similar functional and structural pathways underlie the reproductive development in this group and other marine invertebrates. Nature Publishing Group 2016-11-02 /pmc/articles/PMC5090362/ /pubmed/27805042 http://dx.doi.org/10.1038/srep36516 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Gaitán-Espitia, Juan Diego
Sánchez, Roland
Bruning, Paulina
Cárdenas, Leyla
Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus
title Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus
title_full Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus
title_fullStr Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus
title_full_unstemmed Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus
title_short Functional insights into the testis transcriptome of the edible sea urchin Loxechinus albus
title_sort functional insights into the testis transcriptome of the edible sea urchin loxechinus albus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5090362/
https://www.ncbi.nlm.nih.gov/pubmed/27805042
http://dx.doi.org/10.1038/srep36516
work_keys_str_mv AT gaitanespitiajuandiego functionalinsightsintothetestistranscriptomeoftheedibleseaurchinloxechinusalbus
AT sanchezroland functionalinsightsintothetestistranscriptomeoftheedibleseaurchinloxechinusalbus
AT bruningpaulina functionalinsightsintothetestistranscriptomeoftheedibleseaurchinloxechinusalbus
AT cardenasleyla functionalinsightsintothetestistranscriptomeoftheedibleseaurchinloxechinusalbus