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Implementation of a rapid learning platform: Predicting 2-year survival in laryngeal carcinoma patients in a clinical setting
BACKGROUND AND PURPOSE: To improve quality and personalization of oncology health care, decision aid tools are needed to advise physicians and patients. The aim of this work is to demonstrate the clinical relevance of a survival prediction model as a first step to multi institutional rapid learning...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095076/ https://www.ncbi.nlm.nih.gov/pubmed/27095578 http://dx.doi.org/10.18632/oncotarget.8755 |
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author | Lustberg, Tim Bailey, Michael Thwaites, David I. Miller, Alexis Carolan, Martin Holloway, Lois Velazquez, Emmanuel Rios Hoebers, Frank Dekker, Andre |
author_facet | Lustberg, Tim Bailey, Michael Thwaites, David I. Miller, Alexis Carolan, Martin Holloway, Lois Velazquez, Emmanuel Rios Hoebers, Frank Dekker, Andre |
author_sort | Lustberg, Tim |
collection | PubMed |
description | BACKGROUND AND PURPOSE: To improve quality and personalization of oncology health care, decision aid tools are needed to advise physicians and patients. The aim of this work is to demonstrate the clinical relevance of a survival prediction model as a first step to multi institutional rapid learning and compare this to a clinical trial dataset. MATERIALS AND METHODS: Data extraction and mining tools were used to collect uncurated input parameters from Illawarra Cancer Care Centre's (clinical cohort) oncology information system. Prognosis categories previously established from the Maastricht Radiation Oncology (training cohort) dataset, were applied to the clinical cohort and the radiotherapy only arm of the RTOG-9111 (trial cohort). RESULTS: Data mining identified 125 laryngeal carcinoma patients, ending up with 52 patients in the clinical cohort who were eligible to be evaluated by the model to predict 2-year survival and 177 for the trial cohort. The model was able to classify patients and predict survival in the clinical cohort, but for the trial cohort it failed to do so. CONCLUSIONS: The technical infrastructure and model is able to support the prognosis prediction of laryngeal carcinoma patients in a clinical cohort. The model does not perform well for the highly selective patient population in the trial cohort. |
format | Online Article Text |
id | pubmed-5095076 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-50950762016-11-22 Implementation of a rapid learning platform: Predicting 2-year survival in laryngeal carcinoma patients in a clinical setting Lustberg, Tim Bailey, Michael Thwaites, David I. Miller, Alexis Carolan, Martin Holloway, Lois Velazquez, Emmanuel Rios Hoebers, Frank Dekker, Andre Oncotarget Clinical Research Paper BACKGROUND AND PURPOSE: To improve quality and personalization of oncology health care, decision aid tools are needed to advise physicians and patients. The aim of this work is to demonstrate the clinical relevance of a survival prediction model as a first step to multi institutional rapid learning and compare this to a clinical trial dataset. MATERIALS AND METHODS: Data extraction and mining tools were used to collect uncurated input parameters from Illawarra Cancer Care Centre's (clinical cohort) oncology information system. Prognosis categories previously established from the Maastricht Radiation Oncology (training cohort) dataset, were applied to the clinical cohort and the radiotherapy only arm of the RTOG-9111 (trial cohort). RESULTS: Data mining identified 125 laryngeal carcinoma patients, ending up with 52 patients in the clinical cohort who were eligible to be evaluated by the model to predict 2-year survival and 177 for the trial cohort. The model was able to classify patients and predict survival in the clinical cohort, but for the trial cohort it failed to do so. CONCLUSIONS: The technical infrastructure and model is able to support the prognosis prediction of laryngeal carcinoma patients in a clinical cohort. The model does not perform well for the highly selective patient population in the trial cohort. Impact Journals LLC 2016-04-15 /pmc/articles/PMC5095076/ /pubmed/27095578 http://dx.doi.org/10.18632/oncotarget.8755 Text en Copyright: © 2016 Lustberg et al. http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Clinical Research Paper Lustberg, Tim Bailey, Michael Thwaites, David I. Miller, Alexis Carolan, Martin Holloway, Lois Velazquez, Emmanuel Rios Hoebers, Frank Dekker, Andre Implementation of a rapid learning platform: Predicting 2-year survival in laryngeal carcinoma patients in a clinical setting |
title | Implementation of a rapid learning platform: Predicting 2-year survival in laryngeal carcinoma patients in a clinical setting |
title_full | Implementation of a rapid learning platform: Predicting 2-year survival in laryngeal carcinoma patients in a clinical setting |
title_fullStr | Implementation of a rapid learning platform: Predicting 2-year survival in laryngeal carcinoma patients in a clinical setting |
title_full_unstemmed | Implementation of a rapid learning platform: Predicting 2-year survival in laryngeal carcinoma patients in a clinical setting |
title_short | Implementation of a rapid learning platform: Predicting 2-year survival in laryngeal carcinoma patients in a clinical setting |
title_sort | implementation of a rapid learning platform: predicting 2-year survival in laryngeal carcinoma patients in a clinical setting |
topic | Clinical Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095076/ https://www.ncbi.nlm.nih.gov/pubmed/27095578 http://dx.doi.org/10.18632/oncotarget.8755 |
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