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Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma
Collective cell movement is a key component of many important biological processes, including wound healing, the immune response and the spread of cancers. To understand and influence these movements, we need to be able to identify and quantify the contribution of their different underlying mechanis...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095226/ https://www.ncbi.nlm.nih.gov/pubmed/27798280 http://dx.doi.org/10.1098/rsif.2016.0695 |
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author | Ferguson, Elaine A. Matthiopoulos, Jason Insall, Robert H. Husmeier, Dirk |
author_facet | Ferguson, Elaine A. Matthiopoulos, Jason Insall, Robert H. Husmeier, Dirk |
author_sort | Ferguson, Elaine A. |
collection | PubMed |
description | Collective cell movement is a key component of many important biological processes, including wound healing, the immune response and the spread of cancers. To understand and influence these movements, we need to be able to identify and quantify the contribution of their different underlying mechanisms. Here, we define a set of six candidate models—formulated as advection–diffusion–reaction partial differential equations—that incorporate a range of cell movement drivers. We fitted these models to movement assay data from two different cell types: Dictyostelium discoideum and human melanoma. Model comparison using widely applicable information criterion suggested that movement in both of our study systems was driven primarily by a self-generated gradient in the concentration of a depletable chemical in the cells' environment. For melanoma, there was also evidence that overcrowding influenced movement. These applications of model inference to determine the most likely drivers of cell movement indicate that such statistical techniques have potential to support targeted experimental work in increasing our understanding of collective cell movement in a range of systems. |
format | Online Article Text |
id | pubmed-5095226 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-50952262016-11-10 Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma Ferguson, Elaine A. Matthiopoulos, Jason Insall, Robert H. Husmeier, Dirk J R Soc Interface Life Sciences–Mathematics interface Collective cell movement is a key component of many important biological processes, including wound healing, the immune response and the spread of cancers. To understand and influence these movements, we need to be able to identify and quantify the contribution of their different underlying mechanisms. Here, we define a set of six candidate models—formulated as advection–diffusion–reaction partial differential equations—that incorporate a range of cell movement drivers. We fitted these models to movement assay data from two different cell types: Dictyostelium discoideum and human melanoma. Model comparison using widely applicable information criterion suggested that movement in both of our study systems was driven primarily by a self-generated gradient in the concentration of a depletable chemical in the cells' environment. For melanoma, there was also evidence that overcrowding influenced movement. These applications of model inference to determine the most likely drivers of cell movement indicate that such statistical techniques have potential to support targeted experimental work in increasing our understanding of collective cell movement in a range of systems. The Royal Society 2016-10 /pmc/articles/PMC5095226/ /pubmed/27798280 http://dx.doi.org/10.1098/rsif.2016.0695 Text en © 2016 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Life Sciences–Mathematics interface Ferguson, Elaine A. Matthiopoulos, Jason Insall, Robert H. Husmeier, Dirk Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma |
title | Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma |
title_full | Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma |
title_fullStr | Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma |
title_full_unstemmed | Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma |
title_short | Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma |
title_sort | inference of the drivers of collective movement in two cell types: dictyostelium and melanoma |
topic | Life Sciences–Mathematics interface |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095226/ https://www.ncbi.nlm.nih.gov/pubmed/27798280 http://dx.doi.org/10.1098/rsif.2016.0695 |
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