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Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma

Collective cell movement is a key component of many important biological processes, including wound healing, the immune response and the spread of cancers. To understand and influence these movements, we need to be able to identify and quantify the contribution of their different underlying mechanis...

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Detalles Bibliográficos
Autores principales: Ferguson, Elaine A., Matthiopoulos, Jason, Insall, Robert H., Husmeier, Dirk
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095226/
https://www.ncbi.nlm.nih.gov/pubmed/27798280
http://dx.doi.org/10.1098/rsif.2016.0695
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author Ferguson, Elaine A.
Matthiopoulos, Jason
Insall, Robert H.
Husmeier, Dirk
author_facet Ferguson, Elaine A.
Matthiopoulos, Jason
Insall, Robert H.
Husmeier, Dirk
author_sort Ferguson, Elaine A.
collection PubMed
description Collective cell movement is a key component of many important biological processes, including wound healing, the immune response and the spread of cancers. To understand and influence these movements, we need to be able to identify and quantify the contribution of their different underlying mechanisms. Here, we define a set of six candidate models—formulated as advection–diffusion–reaction partial differential equations—that incorporate a range of cell movement drivers. We fitted these models to movement assay data from two different cell types: Dictyostelium discoideum and human melanoma. Model comparison using widely applicable information criterion suggested that movement in both of our study systems was driven primarily by a self-generated gradient in the concentration of a depletable chemical in the cells' environment. For melanoma, there was also evidence that overcrowding influenced movement. These applications of model inference to determine the most likely drivers of cell movement indicate that such statistical techniques have potential to support targeted experimental work in increasing our understanding of collective cell movement in a range of systems.
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spelling pubmed-50952262016-11-10 Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma Ferguson, Elaine A. Matthiopoulos, Jason Insall, Robert H. Husmeier, Dirk J R Soc Interface Life Sciences–Mathematics interface Collective cell movement is a key component of many important biological processes, including wound healing, the immune response and the spread of cancers. To understand and influence these movements, we need to be able to identify and quantify the contribution of their different underlying mechanisms. Here, we define a set of six candidate models—formulated as advection–diffusion–reaction partial differential equations—that incorporate a range of cell movement drivers. We fitted these models to movement assay data from two different cell types: Dictyostelium discoideum and human melanoma. Model comparison using widely applicable information criterion suggested that movement in both of our study systems was driven primarily by a self-generated gradient in the concentration of a depletable chemical in the cells' environment. For melanoma, there was also evidence that overcrowding influenced movement. These applications of model inference to determine the most likely drivers of cell movement indicate that such statistical techniques have potential to support targeted experimental work in increasing our understanding of collective cell movement in a range of systems. The Royal Society 2016-10 /pmc/articles/PMC5095226/ /pubmed/27798280 http://dx.doi.org/10.1098/rsif.2016.0695 Text en © 2016 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Life Sciences–Mathematics interface
Ferguson, Elaine A.
Matthiopoulos, Jason
Insall, Robert H.
Husmeier, Dirk
Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma
title Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma
title_full Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma
title_fullStr Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma
title_full_unstemmed Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma
title_short Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma
title_sort inference of the drivers of collective movement in two cell types: dictyostelium and melanoma
topic Life Sciences–Mathematics interface
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095226/
https://www.ncbi.nlm.nih.gov/pubmed/27798280
http://dx.doi.org/10.1098/rsif.2016.0695
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