Cargando…

Comparative proteomic assessment of matrisome enrichment methodologies

The matrisome is a complex and heterogeneous collection of extracellular matrix (ECM) and ECM-associated proteins that play important roles in tissue development and homeostasis. While several strategies for matrisome enrichment have been developed, it is currently unknown how the performance of the...

Descripción completa

Detalles Bibliográficos
Autores principales:	Krasny, Lukas, Paul, Angela, Wai, Patty, Howard, Beatrice A., Natrajan, Rachael C., Huang, Paul H.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Portland Press Ltd. 2016
Materias:	Research Articles
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095915/ https://www.ncbi.nlm.nih.gov/pubmed/27589945 http://dx.doi.org/10.1042/BCJ20160686

Ejemplares similares

SWATH mass spectrometry as a tool for quantitative profiling of the matrisome
por: Krasny, Lukas, et al.
Publicado: (2018)

Divide-and-Conquer Matrisome Protein (DC-MaP) Strategy: An MS-Friendly Approach to Proteomic Matrisome Characterization
por: Ouni, Emna, et al.
Publicado: (2020)

Microgravity Effects on the Matrisome
por: Buravkova, Ludmila, et al.
Publicado: (2021)

The Matrisome: In Silico Definition and In Vivo Characterization by Proteomics of Normal and Tumor Extracellular Matrices
por: Naba, Alexandra, et al.
Publicado: (2012)

Proteomics analysis of the matrisome from MC38 experimental mouse liver metastases
por: Yuzhalin, Arseniy E., et al.
Publicado: (2019)

Proteome-wide and matrisome-specific alterations during human pancreas development and maturation
por: Li, Zihui, et al.
Publicado: (2021)

The cartilage matrisome in adolescent idiopathic scoliosis
por: Wise, Carol A., et al.
Publicado: (2020)

The liver matrisome – looking beyond collagens
por: Arteel, Gavin E., et al.
Publicado: (2020)

In-silico definition of the Drosophila melanogaster matrisome
por: Davis, Martin N., et al.
Publicado: (2019)

Quantitative proteomics identifies tumour matrisome signatures in patients with non-small cell lung cancer
por: Titmarsh, Helen F., et al.
Publicado: (2023)

MatrisomeDB: the ECM-protein knowledge database
por: Shao, Xinhao, et al.
Publicado: (2020)

Regulation of the E/I-balance by the neural matrisome
por: Mueller-Buehl, Cornelius, et al.
Publicado: (2023)

Challenges and Opportunities Modeling the Dynamic Tumor Matrisome
por: Peyton, Shelly R., et al.
Publicado: (2023)

Pipeline for precise insoluble matrisome coverage in tissue extracellular matrices
por: Chen, Wei, et al.
Publicado: (2023)

Matrisome Profiling During Intervertebral Disc Development And Ageing
por: Caldeira, Joana, et al.
Publicado: (2017)

Pan-Cancer Analysis of the Genomic Alterations and Mutations of the Matrisome
por: Izzi, Valerio, et al.
Publicado: (2020)

Age-Related Changes in the Matrisome of the Mouse Skeletal Muscle
por: Lofaro, Francesco Demetrio, et al.
Publicado: (2021)

Inflammation-related citrullination of matrisome proteins in human cancer
por: Rappu, Pekka, et al.
Publicado: (2022)

Matrisome, innervation and oxidative metabolism affected in older compared with younger males with similar physical activity
por: Lagerwaard, Bart, et al.
Publicado: (2021)

A core matrisome gene signature predicts cancer outcome
por: Yuzhalin, Arseniy E, et al.
Publicado: (2018)

Pan-cancer analysis connects tumor matrisome to immune response
por: Lim, Su Bin, et al.
Publicado: (2019)

Matrisome Properties of Scaffolds Direct Fibroblasts in Idiopathic Pulmonary Fibrosis
por: Elowsson Rendin, Linda, et al.
Publicado: (2019)

Proteomic analyses of decellularized porcine ovaries identified new matrisome proteins and spatial differences across and within ovarian compartments
por: Henning, Nathaniel F., et al.
Publicado: (2019)

Multi-platform proteomic analysis of Alzheimer’s disease cerebrospinal fluid and plasma reveals network biomarkers associated with proteostasis and the matrisome
por: Dammer, Eric B., et al.
Publicado: (2022)

A mouse SWATH-mass spectrometry reference spectral library enables deconvolution of species-specific proteomic alterations in human tumour xenografts
por: Krasny, Lukas, et al.
Publicado: (2020)

Novel prognostic matrisome-related gene signature of head and neck squamous cell carcinoma
por: Huang, Chao, et al.
Publicado: (2022)

Modelling TGFβR and Hh pathway regulation of prognostic matrisome molecules in ovarian cancer
por: Delaine-Smith, Robin M., et al.
Publicado: (2021)

MicroRNAs Associated with Shoulder Tendon Matrisome Disorganization in Glenohumeral Arthritis
por: Thankam, Finosh G., et al.
Publicado: (2016)

Machine Learning Identifies Robust Matrisome Markers and Regulatory Mechanisms in Cancer
por: Kääriäinen, Anni, et al.
Publicado: (2020)

Matrisome-Associated Gene Expression Patterns Correlating with TIMP2 in Cancer
por: Peeney, David, et al.
Publicado: (2019)

Human cutaneous neurofibroma matrisome revealed by single-cell RNA sequencing
por: Brosseau, Jean-Philippe, et al.
Publicado: (2021)

The Burden of Post-Translational Modification (PTM)—Disrupting Mutations in the Tumor Matrisome
por: Holstein, Elisa, et al.
Publicado: (2021)

The Matrisome Genes From Hepatitis B–Related Hepatocellular Carcinoma Unveiled
por: Chen, Wei, et al.
Publicado: (2021)

The Matrisome Is Associated with Metabolic Reprograming in Stem-like Phenotypes of Gastric Cancer
por: Sung, Ji-Yong, et al.
Publicado: (2022)

Serine protease 35 regulates the fibroblast matrisome in response to hyperosmotic stress
por: Sänger, Catharina S., et al.
Publicado: (2023)

Analysis of matrisome expression patterns in murine and human dorsal root ganglia
por: Vroman, Robin, et al.
Publicado: (2023)

Tissue, age, sex, and disease patterns of matrisome expression in GTEx transcriptome data
por: Nieuwenhuis, Tim O., et al.
Publicado: (2021)

In-Depth Matrisome and Glycoproteomic Analysis of Human Brain Glioblastoma Versus Control Tissue
por: Sethi, Manveen K., et al.
Publicado: (2022)

Co-evolution of matrisome and adaptive adhesion dynamics drives ovarian cancer chemoresistance
por: Pietilä, Elina A., et al.
Publicado: (2021)

The in-silico characterization of the Caenorhabditis elegans matrisome and proposal of a novel collagen classification
por: Teuscher, Alina C., et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_v3hctomful2rj89reqae7thnfq