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CircRNAs in hematopoiesis and hematological malignancies

Cell states in hematopoiesis are controlled by master regulators and by complex circuits of a growing family of RNA species impacting cell phenotype maintenance and plasticity. Circular RNAs (circRNAs) are rapidly gaining the status of particularly stable transcriptome members with distinctive quali...

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Autores principales: Bonizzato, A, Gaffo, E, te Kronnie, G, Bortoluzzi, S
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5098259/
https://www.ncbi.nlm.nih.gov/pubmed/27740630
http://dx.doi.org/10.1038/bcj.2016.81
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author Bonizzato, A
Gaffo, E
te Kronnie, G
Bortoluzzi, S
author_facet Bonizzato, A
Gaffo, E
te Kronnie, G
Bortoluzzi, S
author_sort Bonizzato, A
collection PubMed
description Cell states in hematopoiesis are controlled by master regulators and by complex circuits of a growing family of RNA species impacting cell phenotype maintenance and plasticity. Circular RNAs (circRNAs) are rapidly gaining the status of particularly stable transcriptome members with distinctive qualities. RNA-seq identified thousands of circRNAs with developmental stage- and tissue-specific expression corroborating earlier suggestions that circular isoforms are a natural feature of the cell expression program. CircRNAs are abundantly expressed also in the hematopoietic compartment. There are a number of studies on circRNAs in blood cells, a specific overview is however lacking. In this review we first present current insight in circRNA biogenesis discussing the relevance for hematopoiesis of the highly interleaved processes of splicing and circRNA biogenesis. Regarding molecular functions circRNAs modulate host gene expression, but also compete for binding of microRNAs, RNA-binding proteins or translation initiation and participate in regulatory circuits. We examine circRNA expression in the hematopoietic compartment and in hematologic malignancies and review the recent breakthrough study that identified pathogenic circRNAs derived from leukemia fusion genes. CircRNA high and regulated expression in blood cell types indicate that further studies are warranted to inform the position of these regulators in normal and malignant hematopoiesis.
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spelling pubmed-50982592016-11-18 CircRNAs in hematopoiesis and hematological malignancies Bonizzato, A Gaffo, E te Kronnie, G Bortoluzzi, S Blood Cancer J Review Cell states in hematopoiesis are controlled by master regulators and by complex circuits of a growing family of RNA species impacting cell phenotype maintenance and plasticity. Circular RNAs (circRNAs) are rapidly gaining the status of particularly stable transcriptome members with distinctive qualities. RNA-seq identified thousands of circRNAs with developmental stage- and tissue-specific expression corroborating earlier suggestions that circular isoforms are a natural feature of the cell expression program. CircRNAs are abundantly expressed also in the hematopoietic compartment. There are a number of studies on circRNAs in blood cells, a specific overview is however lacking. In this review we first present current insight in circRNA biogenesis discussing the relevance for hematopoiesis of the highly interleaved processes of splicing and circRNA biogenesis. Regarding molecular functions circRNAs modulate host gene expression, but also compete for binding of microRNAs, RNA-binding proteins or translation initiation and participate in regulatory circuits. We examine circRNA expression in the hematopoietic compartment and in hematologic malignancies and review the recent breakthrough study that identified pathogenic circRNAs derived from leukemia fusion genes. CircRNA high and regulated expression in blood cell types indicate that further studies are warranted to inform the position of these regulators in normal and malignant hematopoiesis. Nature Publishing Group 2016-10 2016-10-14 /pmc/articles/PMC5098259/ /pubmed/27740630 http://dx.doi.org/10.1038/bcj.2016.81 Text en Copyright © 2016 The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Review
Bonizzato, A
Gaffo, E
te Kronnie, G
Bortoluzzi, S
CircRNAs in hematopoiesis and hematological malignancies
title CircRNAs in hematopoiesis and hematological malignancies
title_full CircRNAs in hematopoiesis and hematological malignancies
title_fullStr CircRNAs in hematopoiesis and hematological malignancies
title_full_unstemmed CircRNAs in hematopoiesis and hematological malignancies
title_short CircRNAs in hematopoiesis and hematological malignancies
title_sort circrnas in hematopoiesis and hematological malignancies
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5098259/
https://www.ncbi.nlm.nih.gov/pubmed/27740630
http://dx.doi.org/10.1038/bcj.2016.81
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