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The Comparatively Proteomic Analysis in Response to Cold Stress in Cassava Plantlets
Cassava (Manihot esculenta Crantz) is a tropical root crop and sensitive to low temperature. However, it is poorly to know how cassava can modify its metabolism and growth to adapt to cold stress. An investigation aimed at a better understanding of cold-tolerant mechanism of cassava plantlets was ca...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5099363/ https://www.ncbi.nlm.nih.gov/pubmed/27881899 http://dx.doi.org/10.1007/s11105-016-0987-x |
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author | An, Feifei Li, Genghu Li, Qing X. Li, Kaimian Carvalho, Luiz J. C. B. Ou, Wenjun Chen, Songbi |
author_facet | An, Feifei Li, Genghu Li, Qing X. Li, Kaimian Carvalho, Luiz J. C. B. Ou, Wenjun Chen, Songbi |
author_sort | An, Feifei |
collection | PubMed |
description | Cassava (Manihot esculenta Crantz) is a tropical root crop and sensitive to low temperature. However, it is poorly to know how cassava can modify its metabolism and growth to adapt to cold stress. An investigation aimed at a better understanding of cold-tolerant mechanism of cassava plantlets was carried out with the approaches of physiology and proteomics in the present study. The principal component analysis of seven physiological characteristics showed that electrolyte leakage (EL), chlorophyll content, and malondialdehyde (MDA) may be the most important physiological indexes for determining cold-resistant abilities of cassava. The genome-wide proteomic analysis showed that 20 differential proteins had the same patterns in the apical expanded leaves of cassava SC8 and Col1046. They were mainly related to photosynthesis, carbon metabolism and energy metabolism, defense, protein synthesis, amino acid metabolism, signal transduction, structure, detoxifying and antioxidant, chaperones, and DNA-binding proteins, in which 40 % were related with photosynthesis. The remarkable variation in photosynthetic activity and expression level of peroxiredoxin is closely linked with expression levels of proteomic profiles. Moreover, analysis of differentially expressed proteins under cold stress is an important step toward further elucidation of mechanisms of cold stress resistance. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s11105-016-0987-x) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5099363 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-50993632016-11-21 The Comparatively Proteomic Analysis in Response to Cold Stress in Cassava Plantlets An, Feifei Li, Genghu Li, Qing X. Li, Kaimian Carvalho, Luiz J. C. B. Ou, Wenjun Chen, Songbi Plant Mol Biol Report Original Paper Cassava (Manihot esculenta Crantz) is a tropical root crop and sensitive to low temperature. However, it is poorly to know how cassava can modify its metabolism and growth to adapt to cold stress. An investigation aimed at a better understanding of cold-tolerant mechanism of cassava plantlets was carried out with the approaches of physiology and proteomics in the present study. The principal component analysis of seven physiological characteristics showed that electrolyte leakage (EL), chlorophyll content, and malondialdehyde (MDA) may be the most important physiological indexes for determining cold-resistant abilities of cassava. The genome-wide proteomic analysis showed that 20 differential proteins had the same patterns in the apical expanded leaves of cassava SC8 and Col1046. They were mainly related to photosynthesis, carbon metabolism and energy metabolism, defense, protein synthesis, amino acid metabolism, signal transduction, structure, detoxifying and antioxidant, chaperones, and DNA-binding proteins, in which 40 % were related with photosynthesis. The remarkable variation in photosynthetic activity and expression level of peroxiredoxin is closely linked with expression levels of proteomic profiles. Moreover, analysis of differentially expressed proteins under cold stress is an important step toward further elucidation of mechanisms of cold stress resistance. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s11105-016-0987-x) contains supplementary material, which is available to authorized users. Springer US 2016-05-06 2016 /pmc/articles/PMC5099363/ /pubmed/27881899 http://dx.doi.org/10.1007/s11105-016-0987-x Text en © The Author(s) 2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Original Paper An, Feifei Li, Genghu Li, Qing X. Li, Kaimian Carvalho, Luiz J. C. B. Ou, Wenjun Chen, Songbi The Comparatively Proteomic Analysis in Response to Cold Stress in Cassava Plantlets |
title | The Comparatively Proteomic Analysis in Response to Cold Stress in Cassava Plantlets |
title_full | The Comparatively Proteomic Analysis in Response to Cold Stress in Cassava Plantlets |
title_fullStr | The Comparatively Proteomic Analysis in Response to Cold Stress in Cassava Plantlets |
title_full_unstemmed | The Comparatively Proteomic Analysis in Response to Cold Stress in Cassava Plantlets |
title_short | The Comparatively Proteomic Analysis in Response to Cold Stress in Cassava Plantlets |
title_sort | comparatively proteomic analysis in response to cold stress in cassava plantlets |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5099363/ https://www.ncbi.nlm.nih.gov/pubmed/27881899 http://dx.doi.org/10.1007/s11105-016-0987-x |
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