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Norovirus genotype distribution in outbreaks of acute gastroenteritis among children and older people: an 8-year study

BACKGROUND: Noroviruses (NoVs) are the most frequent cause of acute gastroenteritis worldwide among people of all ages and the leading cause of gastrointestinal disease outbreaks in various settings. To clarify the differences in epidemic situations among different settings, we investigated epidemio...

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Autores principales: Kumazaki, Makoto, Usuku, Shuzo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100332/
https://www.ncbi.nlm.nih.gov/pubmed/27821133
http://dx.doi.org/10.1186/s12879-016-1999-8
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author Kumazaki, Makoto
Usuku, Shuzo
author_facet Kumazaki, Makoto
Usuku, Shuzo
author_sort Kumazaki, Makoto
collection PubMed
description BACKGROUND: Noroviruses (NoVs) are the most frequent cause of acute gastroenteritis worldwide among people of all ages and the leading cause of gastrointestinal disease outbreaks in various settings. To clarify the differences in epidemic situations among different settings, we investigated epidemiological trends and the distribution of NoV genotypes in Yokohama, Japan. METHODS: Between September 2007 and August 2015, 746 outbreaks of NoV gastroenteritis were reported in kindergarten/nursery schools (K/Ns), primary schools (PSs), and nursing homes for the aged (NHs). Stool samples were collected for NoV testing, and the NoV gene was amplified and sequenced to determine the genotype. RESULTS: During the eight seasons, 248 NoV outbreaks occurred in K/Ns, 274 outbreaks in PSs, and 224 outbreaks in NHs. These outbreaks occurred throughout the year, except in August, and the number increased in November and peaked in December. The number of outbreaks that occurred from November to February comprised 76.8 % of all outbreaks. The outbreaks originated in K/Ns or PSs in every season, except for one season. Five genogroup (G)I and nine GII genotypes in K/Ns, six GI and 10 GII genotypes in PSs, and three GI and six GII genotypes in NHs were detected during the eight seasons. GII.4 was the most prevalent genotype in K/Ns and NHs. However, GII.6 was the most prevalent genotype in PSs. The epidemic genotypes in K/Ns and PSs changed by NoV season, although GII.4 was always predominant in NHs. Moreover, the distribution of genotypes was significantly different between epidemic and non-epidemic periods in each facility (p < 0.01 for all). CONCLUSIONS: The epidemic situation of NoV outbreaks differs by facility, NoV season, and month. The genotype distribution is likely dependent on the facility and is significantly different between epidemic and non-epidemic periods.
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spelling pubmed-51003322016-11-08 Norovirus genotype distribution in outbreaks of acute gastroenteritis among children and older people: an 8-year study Kumazaki, Makoto Usuku, Shuzo BMC Infect Dis Research Article BACKGROUND: Noroviruses (NoVs) are the most frequent cause of acute gastroenteritis worldwide among people of all ages and the leading cause of gastrointestinal disease outbreaks in various settings. To clarify the differences in epidemic situations among different settings, we investigated epidemiological trends and the distribution of NoV genotypes in Yokohama, Japan. METHODS: Between September 2007 and August 2015, 746 outbreaks of NoV gastroenteritis were reported in kindergarten/nursery schools (K/Ns), primary schools (PSs), and nursing homes for the aged (NHs). Stool samples were collected for NoV testing, and the NoV gene was amplified and sequenced to determine the genotype. RESULTS: During the eight seasons, 248 NoV outbreaks occurred in K/Ns, 274 outbreaks in PSs, and 224 outbreaks in NHs. These outbreaks occurred throughout the year, except in August, and the number increased in November and peaked in December. The number of outbreaks that occurred from November to February comprised 76.8 % of all outbreaks. The outbreaks originated in K/Ns or PSs in every season, except for one season. Five genogroup (G)I and nine GII genotypes in K/Ns, six GI and 10 GII genotypes in PSs, and three GI and six GII genotypes in NHs were detected during the eight seasons. GII.4 was the most prevalent genotype in K/Ns and NHs. However, GII.6 was the most prevalent genotype in PSs. The epidemic genotypes in K/Ns and PSs changed by NoV season, although GII.4 was always predominant in NHs. Moreover, the distribution of genotypes was significantly different between epidemic and non-epidemic periods in each facility (p < 0.01 for all). CONCLUSIONS: The epidemic situation of NoV outbreaks differs by facility, NoV season, and month. The genotype distribution is likely dependent on the facility and is significantly different between epidemic and non-epidemic periods. BioMed Central 2016-11-07 /pmc/articles/PMC5100332/ /pubmed/27821133 http://dx.doi.org/10.1186/s12879-016-1999-8 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Kumazaki, Makoto
Usuku, Shuzo
Norovirus genotype distribution in outbreaks of acute gastroenteritis among children and older people: an 8-year study
title Norovirus genotype distribution in outbreaks of acute gastroenteritis among children and older people: an 8-year study
title_full Norovirus genotype distribution in outbreaks of acute gastroenteritis among children and older people: an 8-year study
title_fullStr Norovirus genotype distribution in outbreaks of acute gastroenteritis among children and older people: an 8-year study
title_full_unstemmed Norovirus genotype distribution in outbreaks of acute gastroenteritis among children and older people: an 8-year study
title_short Norovirus genotype distribution in outbreaks of acute gastroenteritis among children and older people: an 8-year study
title_sort norovirus genotype distribution in outbreaks of acute gastroenteritis among children and older people: an 8-year study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100332/
https://www.ncbi.nlm.nih.gov/pubmed/27821133
http://dx.doi.org/10.1186/s12879-016-1999-8
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