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Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley

BACKGROUND: Tibetan wild barley (Hordeum spontaneum L.) has been confirmed to contain elite accessions in tolerance to abiotic stresses, including salinity. However, molecular mechanisms underlying genotypic difference of salt tolerance in wild barley are unknown. RESULTS: In this study, two Tibetan...

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Autores principales: Shen, Qiufang, Fu, Liangbo, Dai, Fei, Jiang, Lixi, Zhang, Guoping, Wu, Dezhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100661/
https://www.ncbi.nlm.nih.gov/pubmed/27821058
http://dx.doi.org/10.1186/s12864-016-3242-9
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author Shen, Qiufang
Fu, Liangbo
Dai, Fei
Jiang, Lixi
Zhang, Guoping
Wu, Dezhi
author_facet Shen, Qiufang
Fu, Liangbo
Dai, Fei
Jiang, Lixi
Zhang, Guoping
Wu, Dezhi
author_sort Shen, Qiufang
collection PubMed
description BACKGROUND: Tibetan wild barley (Hordeum spontaneum L.) has been confirmed to contain elite accessions in tolerance to abiotic stresses, including salinity. However, molecular mechanisms underlying genotypic difference of salt tolerance in wild barley are unknown. RESULTS: In this study, two Tibetan wild barley accessions (XZ26 and XZ169), differing greatly in salt tolerance, were used to determine changes of ionomic, metabolomic and proteomic profiles in the shoots exposed to salt stress at seedling stage. Compared with XZ169, XZ26 showed better shoot growth and less Na accumulation after 7 days treatments. Salt stress caused significant reduction in concentrations of sucrose and metabolites involved in glycolysis pathway in XZ169, and elevated level of tricarboxylic acid (TCA) cycle, as reflected by up-accumulation of citric acid, aconitic acid and succinic acid, especially under high salinity, but not in XZ26. Correspondingly, proteomic analysis further proved the findings from the metabolomic study. CONCLUSION: XZ26 maintained a lower Na concentration in the shoots and developed superior shoot adaptive strategies to salt stress. The current result provides possible utilization of Tibetan wild barley in developing barley cultivars for salt tolerance. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-3242-9) contains supplementary material, which is available to authorized users.
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spelling pubmed-51006612016-11-10 Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley Shen, Qiufang Fu, Liangbo Dai, Fei Jiang, Lixi Zhang, Guoping Wu, Dezhi BMC Genomics Research Article BACKGROUND: Tibetan wild barley (Hordeum spontaneum L.) has been confirmed to contain elite accessions in tolerance to abiotic stresses, including salinity. However, molecular mechanisms underlying genotypic difference of salt tolerance in wild barley are unknown. RESULTS: In this study, two Tibetan wild barley accessions (XZ26 and XZ169), differing greatly in salt tolerance, were used to determine changes of ionomic, metabolomic and proteomic profiles in the shoots exposed to salt stress at seedling stage. Compared with XZ169, XZ26 showed better shoot growth and less Na accumulation after 7 days treatments. Salt stress caused significant reduction in concentrations of sucrose and metabolites involved in glycolysis pathway in XZ169, and elevated level of tricarboxylic acid (TCA) cycle, as reflected by up-accumulation of citric acid, aconitic acid and succinic acid, especially under high salinity, but not in XZ26. Correspondingly, proteomic analysis further proved the findings from the metabolomic study. CONCLUSION: XZ26 maintained a lower Na concentration in the shoots and developed superior shoot adaptive strategies to salt stress. The current result provides possible utilization of Tibetan wild barley in developing barley cultivars for salt tolerance. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-3242-9) contains supplementary material, which is available to authorized users. BioMed Central 2016-11-07 /pmc/articles/PMC5100661/ /pubmed/27821058 http://dx.doi.org/10.1186/s12864-016-3242-9 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Shen, Qiufang
Fu, Liangbo
Dai, Fei
Jiang, Lixi
Zhang, Guoping
Wu, Dezhi
Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley
title Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley
title_full Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley
title_fullStr Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley
title_full_unstemmed Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley
title_short Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley
title_sort multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in tibetan wild barley
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100661/
https://www.ncbi.nlm.nih.gov/pubmed/27821058
http://dx.doi.org/10.1186/s12864-016-3242-9
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