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Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley
BACKGROUND: Tibetan wild barley (Hordeum spontaneum L.) has been confirmed to contain elite accessions in tolerance to abiotic stresses, including salinity. However, molecular mechanisms underlying genotypic difference of salt tolerance in wild barley are unknown. RESULTS: In this study, two Tibetan...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100661/ https://www.ncbi.nlm.nih.gov/pubmed/27821058 http://dx.doi.org/10.1186/s12864-016-3242-9 |
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author | Shen, Qiufang Fu, Liangbo Dai, Fei Jiang, Lixi Zhang, Guoping Wu, Dezhi |
author_facet | Shen, Qiufang Fu, Liangbo Dai, Fei Jiang, Lixi Zhang, Guoping Wu, Dezhi |
author_sort | Shen, Qiufang |
collection | PubMed |
description | BACKGROUND: Tibetan wild barley (Hordeum spontaneum L.) has been confirmed to contain elite accessions in tolerance to abiotic stresses, including salinity. However, molecular mechanisms underlying genotypic difference of salt tolerance in wild barley are unknown. RESULTS: In this study, two Tibetan wild barley accessions (XZ26 and XZ169), differing greatly in salt tolerance, were used to determine changes of ionomic, metabolomic and proteomic profiles in the shoots exposed to salt stress at seedling stage. Compared with XZ169, XZ26 showed better shoot growth and less Na accumulation after 7 days treatments. Salt stress caused significant reduction in concentrations of sucrose and metabolites involved in glycolysis pathway in XZ169, and elevated level of tricarboxylic acid (TCA) cycle, as reflected by up-accumulation of citric acid, aconitic acid and succinic acid, especially under high salinity, but not in XZ26. Correspondingly, proteomic analysis further proved the findings from the metabolomic study. CONCLUSION: XZ26 maintained a lower Na concentration in the shoots and developed superior shoot adaptive strategies to salt stress. The current result provides possible utilization of Tibetan wild barley in developing barley cultivars for salt tolerance. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-3242-9) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5100661 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-51006612016-11-10 Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley Shen, Qiufang Fu, Liangbo Dai, Fei Jiang, Lixi Zhang, Guoping Wu, Dezhi BMC Genomics Research Article BACKGROUND: Tibetan wild barley (Hordeum spontaneum L.) has been confirmed to contain elite accessions in tolerance to abiotic stresses, including salinity. However, molecular mechanisms underlying genotypic difference of salt tolerance in wild barley are unknown. RESULTS: In this study, two Tibetan wild barley accessions (XZ26 and XZ169), differing greatly in salt tolerance, were used to determine changes of ionomic, metabolomic and proteomic profiles in the shoots exposed to salt stress at seedling stage. Compared with XZ169, XZ26 showed better shoot growth and less Na accumulation after 7 days treatments. Salt stress caused significant reduction in concentrations of sucrose and metabolites involved in glycolysis pathway in XZ169, and elevated level of tricarboxylic acid (TCA) cycle, as reflected by up-accumulation of citric acid, aconitic acid and succinic acid, especially under high salinity, but not in XZ26. Correspondingly, proteomic analysis further proved the findings from the metabolomic study. CONCLUSION: XZ26 maintained a lower Na concentration in the shoots and developed superior shoot adaptive strategies to salt stress. The current result provides possible utilization of Tibetan wild barley in developing barley cultivars for salt tolerance. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-3242-9) contains supplementary material, which is available to authorized users. BioMed Central 2016-11-07 /pmc/articles/PMC5100661/ /pubmed/27821058 http://dx.doi.org/10.1186/s12864-016-3242-9 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Shen, Qiufang Fu, Liangbo Dai, Fei Jiang, Lixi Zhang, Guoping Wu, Dezhi Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley |
title | Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley |
title_full | Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley |
title_fullStr | Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley |
title_full_unstemmed | Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley |
title_short | Multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in Tibetan wild barley |
title_sort | multi-omics analysis reveals molecular mechanisms of shoot adaption to salt stress in tibetan wild barley |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100661/ https://www.ncbi.nlm.nih.gov/pubmed/27821058 http://dx.doi.org/10.1186/s12864-016-3242-9 |
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