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Influence of soil contamination with PAH on microbial community dynamics and expression level of genes responsible for biodegradation of PAH and production of rhamnolipids

The aim of this study was to evaluate the effect of bioaugmentation and addition of rhamnolipids on the biodegradation of PAHs in artificially contaminated soil, expression of genes crucial for the biodegradation process (PAHRHDαGN, PAHRHDαGP), and the synthesis of rhamnolipids as well as population...

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Autores principales: Szczepaniak, Zuzanna, Czarny, Jakub, Staninska-Pięta, Justyna, Lisiecki, Piotr, Zgoła-Grześkowiak, Agnieszka, Cyplik, Paweł, Chrzanowski, Łukasz, Wolko, Łukasz, Marecik, Roman, Juzwa, Wojciech, Glazar, Katarzyna, Piotrowska-Cyplik, Agnieszka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5101289/
https://www.ncbi.nlm.nih.gov/pubmed/27585583
http://dx.doi.org/10.1007/s11356-016-7500-9
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author Szczepaniak, Zuzanna
Czarny, Jakub
Staninska-Pięta, Justyna
Lisiecki, Piotr
Zgoła-Grześkowiak, Agnieszka
Cyplik, Paweł
Chrzanowski, Łukasz
Wolko, Łukasz
Marecik, Roman
Juzwa, Wojciech
Glazar, Katarzyna
Piotrowska-Cyplik, Agnieszka
author_facet Szczepaniak, Zuzanna
Czarny, Jakub
Staninska-Pięta, Justyna
Lisiecki, Piotr
Zgoła-Grześkowiak, Agnieszka
Cyplik, Paweł
Chrzanowski, Łukasz
Wolko, Łukasz
Marecik, Roman
Juzwa, Wojciech
Glazar, Katarzyna
Piotrowska-Cyplik, Agnieszka
author_sort Szczepaniak, Zuzanna
collection PubMed
description The aim of this study was to evaluate the effect of bioaugmentation and addition of rhamnolipids on the biodegradation of PAHs in artificially contaminated soil, expression of genes crucial for the biodegradation process (PAHRHDαGN, PAHRHDαGP), and the synthesis of rhamnolipids as well as population changes in the soil bacterial metabiome. The positive effect of bioaugmentation and addition of rhamnolipids on the bioremediation of the majority of PAHs was confirmed during the early stages of treatment, especially in case of the most structurally complicated compounds. The results of metagenomic analysis indicated that the initial changes in the soil metabiome caused by bioaugmentation diminished after 3 months and that the community structure in treated soil was similar to control. The survival period of bacteria introduced into the soil via bioaugmentation reached a maximum of 3 months. The increased expression of genes observed after addition of PAH into the soil also returned to the initial conditions after 3 months.
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spelling pubmed-51012892016-11-21 Influence of soil contamination with PAH on microbial community dynamics and expression level of genes responsible for biodegradation of PAH and production of rhamnolipids Szczepaniak, Zuzanna Czarny, Jakub Staninska-Pięta, Justyna Lisiecki, Piotr Zgoła-Grześkowiak, Agnieszka Cyplik, Paweł Chrzanowski, Łukasz Wolko, Łukasz Marecik, Roman Juzwa, Wojciech Glazar, Katarzyna Piotrowska-Cyplik, Agnieszka Environ Sci Pollut Res Int Research Article The aim of this study was to evaluate the effect of bioaugmentation and addition of rhamnolipids on the biodegradation of PAHs in artificially contaminated soil, expression of genes crucial for the biodegradation process (PAHRHDαGN, PAHRHDαGP), and the synthesis of rhamnolipids as well as population changes in the soil bacterial metabiome. The positive effect of bioaugmentation and addition of rhamnolipids on the bioremediation of the majority of PAHs was confirmed during the early stages of treatment, especially in case of the most structurally complicated compounds. The results of metagenomic analysis indicated that the initial changes in the soil metabiome caused by bioaugmentation diminished after 3 months and that the community structure in treated soil was similar to control. The survival period of bacteria introduced into the soil via bioaugmentation reached a maximum of 3 months. The increased expression of genes observed after addition of PAH into the soil also returned to the initial conditions after 3 months. Springer Berlin Heidelberg 2016-09-01 2016 /pmc/articles/PMC5101289/ /pubmed/27585583 http://dx.doi.org/10.1007/s11356-016-7500-9 Text en © The Author(s) 2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Research Article
Szczepaniak, Zuzanna
Czarny, Jakub
Staninska-Pięta, Justyna
Lisiecki, Piotr
Zgoła-Grześkowiak, Agnieszka
Cyplik, Paweł
Chrzanowski, Łukasz
Wolko, Łukasz
Marecik, Roman
Juzwa, Wojciech
Glazar, Katarzyna
Piotrowska-Cyplik, Agnieszka
Influence of soil contamination with PAH on microbial community dynamics and expression level of genes responsible for biodegradation of PAH and production of rhamnolipids
title Influence of soil contamination with PAH on microbial community dynamics and expression level of genes responsible for biodegradation of PAH and production of rhamnolipids
title_full Influence of soil contamination with PAH on microbial community dynamics and expression level of genes responsible for biodegradation of PAH and production of rhamnolipids
title_fullStr Influence of soil contamination with PAH on microbial community dynamics and expression level of genes responsible for biodegradation of PAH and production of rhamnolipids
title_full_unstemmed Influence of soil contamination with PAH on microbial community dynamics and expression level of genes responsible for biodegradation of PAH and production of rhamnolipids
title_short Influence of soil contamination with PAH on microbial community dynamics and expression level of genes responsible for biodegradation of PAH and production of rhamnolipids
title_sort influence of soil contamination with pah on microbial community dynamics and expression level of genes responsible for biodegradation of pah and production of rhamnolipids
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5101289/
https://www.ncbi.nlm.nih.gov/pubmed/27585583
http://dx.doi.org/10.1007/s11356-016-7500-9
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