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Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification

Recently, Deep Learning, especially through Convolutional Neural Networks (CNNs) has been widely used to enable the extraction of highly representative features. This is done among the network layers by filtering, selecting, and using these features in the last fully connected layers for pattern cla...

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Detalles Bibliográficos
Autores principales: Ribeiro, Eduardo, Uhl, Andreas, Wimmer, Georg, Häfner, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5101370/
https://www.ncbi.nlm.nih.gov/pubmed/27847543
http://dx.doi.org/10.1155/2016/6584725
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author Ribeiro, Eduardo
Uhl, Andreas
Wimmer, Georg
Häfner, Michael
author_facet Ribeiro, Eduardo
Uhl, Andreas
Wimmer, Georg
Häfner, Michael
author_sort Ribeiro, Eduardo
collection PubMed
description Recently, Deep Learning, especially through Convolutional Neural Networks (CNNs) has been widely used to enable the extraction of highly representative features. This is done among the network layers by filtering, selecting, and using these features in the last fully connected layers for pattern classification. However, CNN training for automated endoscopic image classification still provides a challenge due to the lack of large and publicly available annotated databases. In this work we explore Deep Learning for the automated classification of colonic polyps using different configurations for training CNNs from scratch (or full training) and distinct architectures of pretrained CNNs tested on 8-HD-endoscopic image databases acquired using different modalities. We compare our results with some commonly used features for colonic polyp classification and the good results suggest that features learned by CNNs trained from scratch and the “off-the-shelf” CNNs features can be highly relevant for automated classification of colonic polyps. Moreover, we also show that the combination of classical features and “off-the-shelf” CNNs features can be a good approach to further improve the results.
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spelling pubmed-51013702016-11-15 Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification Ribeiro, Eduardo Uhl, Andreas Wimmer, Georg Häfner, Michael Comput Math Methods Med Research Article Recently, Deep Learning, especially through Convolutional Neural Networks (CNNs) has been widely used to enable the extraction of highly representative features. This is done among the network layers by filtering, selecting, and using these features in the last fully connected layers for pattern classification. However, CNN training for automated endoscopic image classification still provides a challenge due to the lack of large and publicly available annotated databases. In this work we explore Deep Learning for the automated classification of colonic polyps using different configurations for training CNNs from scratch (or full training) and distinct architectures of pretrained CNNs tested on 8-HD-endoscopic image databases acquired using different modalities. We compare our results with some commonly used features for colonic polyp classification and the good results suggest that features learned by CNNs trained from scratch and the “off-the-shelf” CNNs features can be highly relevant for automated classification of colonic polyps. Moreover, we also show that the combination of classical features and “off-the-shelf” CNNs features can be a good approach to further improve the results. Hindawi Publishing Corporation 2016 2016-10-26 /pmc/articles/PMC5101370/ /pubmed/27847543 http://dx.doi.org/10.1155/2016/6584725 Text en Copyright © 2016 Eduardo Ribeiro et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Ribeiro, Eduardo
Uhl, Andreas
Wimmer, Georg
Häfner, Michael
Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification
title Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification
title_full Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification
title_fullStr Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification
title_full_unstemmed Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification
title_short Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification
title_sort exploring deep learning and transfer learning for colonic polyp classification
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5101370/
https://www.ncbi.nlm.nih.gov/pubmed/27847543
http://dx.doi.org/10.1155/2016/6584725
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