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Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites

Isothermal nucleic acid amplification assays such as the loop mediated isothermal amplification (LAMP), are well suited for field use as they do not require thermal cyclers to amplify the DNA. To further facilitate the use of LAMP assays in remote settings, simpler sample preparation methods and lyo...

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Autores principales: Lucchi, Naomi W., Gaye, Marie, Diallo, Mammadou Alpha, Goldman, Ira F., Ljolje, Dragan, Deme, Awa Bineta, Badiane, Aida, Ndiaye, Yaye Die, Barnwell, John W., Udhayakumar, Venkatachalam, Ndiaye, Daouda
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5101795/
https://www.ncbi.nlm.nih.gov/pubmed/27827432
http://dx.doi.org/10.1038/srep36808
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author Lucchi, Naomi W.
Gaye, Marie
Diallo, Mammadou Alpha
Goldman, Ira F.
Ljolje, Dragan
Deme, Awa Bineta
Badiane, Aida
Ndiaye, Yaye Die
Barnwell, John W.
Udhayakumar, Venkatachalam
Ndiaye, Daouda
author_facet Lucchi, Naomi W.
Gaye, Marie
Diallo, Mammadou Alpha
Goldman, Ira F.
Ljolje, Dragan
Deme, Awa Bineta
Badiane, Aida
Ndiaye, Yaye Die
Barnwell, John W.
Udhayakumar, Venkatachalam
Ndiaye, Daouda
author_sort Lucchi, Naomi W.
collection PubMed
description Isothermal nucleic acid amplification assays such as the loop mediated isothermal amplification (LAMP), are well suited for field use as they do not require thermal cyclers to amplify the DNA. To further facilitate the use of LAMP assays in remote settings, simpler sample preparation methods and lyophilized reagents are required. The performance of a commercial malaria LAMP assay (Illumigene Malaria LAMP) was evaluated using two sample preparation workflows (simple filtration prep (SFP)) and gravity-driven filtration prep (GFP)) and pre-dispensed lyophilized reagents. Laboratory and clinical samples were tested in a field laboratory in Senegal and the results independently confirmed in a reference laboratory in the U.S.A. The Illumigene Malaria LAMP assay was easily implemented in the clinical laboratory and gave similar results to a real-time PCR reference test with limits of detection of ≤2.0 parasites/μl depending on the sample preparation method used. This assay reliably detected Plasmodium sp. parasites in a simple low-tech format, providing a much needed alternative to the more complex molecular tests for malaria diagnosis.
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spelling pubmed-51017952016-11-14 Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites Lucchi, Naomi W. Gaye, Marie Diallo, Mammadou Alpha Goldman, Ira F. Ljolje, Dragan Deme, Awa Bineta Badiane, Aida Ndiaye, Yaye Die Barnwell, John W. Udhayakumar, Venkatachalam Ndiaye, Daouda Sci Rep Article Isothermal nucleic acid amplification assays such as the loop mediated isothermal amplification (LAMP), are well suited for field use as they do not require thermal cyclers to amplify the DNA. To further facilitate the use of LAMP assays in remote settings, simpler sample preparation methods and lyophilized reagents are required. The performance of a commercial malaria LAMP assay (Illumigene Malaria LAMP) was evaluated using two sample preparation workflows (simple filtration prep (SFP)) and gravity-driven filtration prep (GFP)) and pre-dispensed lyophilized reagents. Laboratory and clinical samples were tested in a field laboratory in Senegal and the results independently confirmed in a reference laboratory in the U.S.A. The Illumigene Malaria LAMP assay was easily implemented in the clinical laboratory and gave similar results to a real-time PCR reference test with limits of detection of ≤2.0 parasites/μl depending on the sample preparation method used. This assay reliably detected Plasmodium sp. parasites in a simple low-tech format, providing a much needed alternative to the more complex molecular tests for malaria diagnosis. Nature Publishing Group 2016-11-09 /pmc/articles/PMC5101795/ /pubmed/27827432 http://dx.doi.org/10.1038/srep36808 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Lucchi, Naomi W.
Gaye, Marie
Diallo, Mammadou Alpha
Goldman, Ira F.
Ljolje, Dragan
Deme, Awa Bineta
Badiane, Aida
Ndiaye, Yaye Die
Barnwell, John W.
Udhayakumar, Venkatachalam
Ndiaye, Daouda
Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites
title Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites
title_full Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites
title_fullStr Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites
title_full_unstemmed Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites
title_short Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites
title_sort evaluation of the illumigene malaria lamp: a robust molecular diagnostic tool for malaria parasites
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5101795/
https://www.ncbi.nlm.nih.gov/pubmed/27827432
http://dx.doi.org/10.1038/srep36808
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