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Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase
[Image: see text] Primary deuterium kinetic isotope effects (1°DKIE) on (k(cat)/K(GA), M(–1) s(–1)) for dianion (X(2–)) activated hydride transfer from NADL to glycolaldehyde (GA) catalyzed by glycerol-3-phosphate dehydrogenase were determined over a 2100-fold range of enzyme reactivity: (X(2–), 1°D...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5105681/ https://www.ncbi.nlm.nih.gov/pubmed/27769116 http://dx.doi.org/10.1021/jacs.6b07028 |
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author | Reyes, Archie C. Amyes, Tina L. Richard, John P. |
author_facet | Reyes, Archie C. Amyes, Tina L. Richard, John P. |
author_sort | Reyes, Archie C. |
collection | PubMed |
description | [Image: see text] Primary deuterium kinetic isotope effects (1°DKIE) on (k(cat)/K(GA), M(–1) s(–1)) for dianion (X(2–)) activated hydride transfer from NADL to glycolaldehyde (GA) catalyzed by glycerol-3-phosphate dehydrogenase were determined over a 2100-fold range of enzyme reactivity: (X(2–), 1°DKIE); FPO(3)(2–), 2.8 ± 0.1; HPO(3)(2–), 2.5 ± 0.1; SO(4)(2–), 2.8 ± 0.2; HOPO(3)(2–), 2.5 ± 0.1; S(2)O(3)(2–), 2.9 ± 0.1; unactivated; 2.4 ± 0.2. Similar 1°DKIEs were determined for k(cat). The observed 1°DKIEs are essentially independent of changes in enzyme reactivity with changing dianion activator. The results are consistent with (i) fast and reversible ligand binding; (ii) the conclusion that the observed 1°DKIEs are equal to the intrinsic 1°DKIE on hydride transfer from NADL to GA; (iii) similar intrinsic 1°DKIEs on GPDH-catalyzed reduction of the substrate pieces and the whole physiological substrate dihydroxyacetone phosphate. The ground-state binding interactions for different X(2–) are similar, but there are large differences in the transition state interactions for different X(2–). The changes in transition state binding interactions are expressed as changes in k(cat) and are proposed to represent changes in stabilization of the active closed form of GPDH. The 1°DKIEs are much smaller than observed for enzyme-catalyzed hydrogen transfer that occurs mainly by quantum-mechanical tunneling. |
format | Online Article Text |
id | pubmed-5105681 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-51056812017-10-21 Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase Reyes, Archie C. Amyes, Tina L. Richard, John P. J Am Chem Soc [Image: see text] Primary deuterium kinetic isotope effects (1°DKIE) on (k(cat)/K(GA), M(–1) s(–1)) for dianion (X(2–)) activated hydride transfer from NADL to glycolaldehyde (GA) catalyzed by glycerol-3-phosphate dehydrogenase were determined over a 2100-fold range of enzyme reactivity: (X(2–), 1°DKIE); FPO(3)(2–), 2.8 ± 0.1; HPO(3)(2–), 2.5 ± 0.1; SO(4)(2–), 2.8 ± 0.2; HOPO(3)(2–), 2.5 ± 0.1; S(2)O(3)(2–), 2.9 ± 0.1; unactivated; 2.4 ± 0.2. Similar 1°DKIEs were determined for k(cat). The observed 1°DKIEs are essentially independent of changes in enzyme reactivity with changing dianion activator. The results are consistent with (i) fast and reversible ligand binding; (ii) the conclusion that the observed 1°DKIEs are equal to the intrinsic 1°DKIE on hydride transfer from NADL to GA; (iii) similar intrinsic 1°DKIEs on GPDH-catalyzed reduction of the substrate pieces and the whole physiological substrate dihydroxyacetone phosphate. The ground-state binding interactions for different X(2–) are similar, but there are large differences in the transition state interactions for different X(2–). The changes in transition state binding interactions are expressed as changes in k(cat) and are proposed to represent changes in stabilization of the active closed form of GPDH. The 1°DKIEs are much smaller than observed for enzyme-catalyzed hydrogen transfer that occurs mainly by quantum-mechanical tunneling. American Chemical Society 2016-10-21 2016-11-09 /pmc/articles/PMC5105681/ /pubmed/27769116 http://dx.doi.org/10.1021/jacs.6b07028 Text en Copyright © 2016 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Reyes, Archie C. Amyes, Tina L. Richard, John P. Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase |
title | Structure–Reactivity
Effects on Intrinsic Primary
Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate
Dehydrogenase |
title_full | Structure–Reactivity
Effects on Intrinsic Primary
Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate
Dehydrogenase |
title_fullStr | Structure–Reactivity
Effects on Intrinsic Primary
Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate
Dehydrogenase |
title_full_unstemmed | Structure–Reactivity
Effects on Intrinsic Primary
Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate
Dehydrogenase |
title_short | Structure–Reactivity
Effects on Intrinsic Primary
Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate
Dehydrogenase |
title_sort | structure–reactivity
effects on intrinsic primary
kinetic isotope effects for hydride transfer catalyzed by glycerol-3-phosphate
dehydrogenase |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5105681/ https://www.ncbi.nlm.nih.gov/pubmed/27769116 http://dx.doi.org/10.1021/jacs.6b07028 |
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