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Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase

[Image: see text] Primary deuterium kinetic isotope effects (1°DKIE) on (k(cat)/K(GA), M(–1) s(–1)) for dianion (X(2–)) activated hydride transfer from NADL to glycolaldehyde (GA) catalyzed by glycerol-3-phosphate dehydrogenase were determined over a 2100-fold range of enzyme reactivity: (X(2–), 1°D...

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Autores principales: Reyes, Archie C., Amyes, Tina L., Richard, John P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2016
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5105681/
https://www.ncbi.nlm.nih.gov/pubmed/27769116
http://dx.doi.org/10.1021/jacs.6b07028
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author Reyes, Archie C.
Amyes, Tina L.
Richard, John P.
author_facet Reyes, Archie C.
Amyes, Tina L.
Richard, John P.
author_sort Reyes, Archie C.
collection PubMed
description [Image: see text] Primary deuterium kinetic isotope effects (1°DKIE) on (k(cat)/K(GA), M(–1) s(–1)) for dianion (X(2–)) activated hydride transfer from NADL to glycolaldehyde (GA) catalyzed by glycerol-3-phosphate dehydrogenase were determined over a 2100-fold range of enzyme reactivity: (X(2–), 1°DKIE); FPO(3)(2–), 2.8 ± 0.1; HPO(3)(2–), 2.5 ± 0.1; SO(4)(2–), 2.8 ± 0.2; HOPO(3)(2–), 2.5 ± 0.1; S(2)O(3)(2–), 2.9 ± 0.1; unactivated; 2.4 ± 0.2. Similar 1°DKIEs were determined for k(cat). The observed 1°DKIEs are essentially independent of changes in enzyme reactivity with changing dianion activator. The results are consistent with (i) fast and reversible ligand binding; (ii) the conclusion that the observed 1°DKIEs are equal to the intrinsic 1°DKIE on hydride transfer from NADL to GA; (iii) similar intrinsic 1°DKIEs on GPDH-catalyzed reduction of the substrate pieces and the whole physiological substrate dihydroxyacetone phosphate. The ground-state binding interactions for different X(2–) are similar, but there are large differences in the transition state interactions for different X(2–). The changes in transition state binding interactions are expressed as changes in k(cat) and are proposed to represent changes in stabilization of the active closed form of GPDH. The 1°DKIEs are much smaller than observed for enzyme-catalyzed hydrogen transfer that occurs mainly by quantum-mechanical tunneling.
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spelling pubmed-51056812017-10-21 Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase Reyes, Archie C. Amyes, Tina L. Richard, John P. J Am Chem Soc [Image: see text] Primary deuterium kinetic isotope effects (1°DKIE) on (k(cat)/K(GA), M(–1) s(–1)) for dianion (X(2–)) activated hydride transfer from NADL to glycolaldehyde (GA) catalyzed by glycerol-3-phosphate dehydrogenase were determined over a 2100-fold range of enzyme reactivity: (X(2–), 1°DKIE); FPO(3)(2–), 2.8 ± 0.1; HPO(3)(2–), 2.5 ± 0.1; SO(4)(2–), 2.8 ± 0.2; HOPO(3)(2–), 2.5 ± 0.1; S(2)O(3)(2–), 2.9 ± 0.1; unactivated; 2.4 ± 0.2. Similar 1°DKIEs were determined for k(cat). The observed 1°DKIEs are essentially independent of changes in enzyme reactivity with changing dianion activator. The results are consistent with (i) fast and reversible ligand binding; (ii) the conclusion that the observed 1°DKIEs are equal to the intrinsic 1°DKIE on hydride transfer from NADL to GA; (iii) similar intrinsic 1°DKIEs on GPDH-catalyzed reduction of the substrate pieces and the whole physiological substrate dihydroxyacetone phosphate. The ground-state binding interactions for different X(2–) are similar, but there are large differences in the transition state interactions for different X(2–). The changes in transition state binding interactions are expressed as changes in k(cat) and are proposed to represent changes in stabilization of the active closed form of GPDH. The 1°DKIEs are much smaller than observed for enzyme-catalyzed hydrogen transfer that occurs mainly by quantum-mechanical tunneling. American Chemical Society 2016-10-21 2016-11-09 /pmc/articles/PMC5105681/ /pubmed/27769116 http://dx.doi.org/10.1021/jacs.6b07028 Text en Copyright © 2016 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes.
spellingShingle Reyes, Archie C.
Amyes, Tina L.
Richard, John P.
Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase
title Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase
title_full Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase
title_fullStr Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase
title_full_unstemmed Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase
title_short Structure–Reactivity Effects on Intrinsic Primary Kinetic Isotope Effects for Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase
title_sort structure–reactivity effects on intrinsic primary kinetic isotope effects for hydride transfer catalyzed by glycerol-3-phosphate dehydrogenase
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5105681/
https://www.ncbi.nlm.nih.gov/pubmed/27769116
http://dx.doi.org/10.1021/jacs.6b07028
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