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Structure and Function of Cyanobacterial DHDPS and DHDPR
Lysine biosynthesis in bacteria and plants commences with a condensation reaction catalysed by dihydrodipicolinate synthase (DHDPS) followed by a reduction reaction catalysed by dihydrodipicolinate reductase (DHDPR). Interestingly, both DHDPS and DHDPR exist as different oligomeric forms in bacteria...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5109050/ https://www.ncbi.nlm.nih.gov/pubmed/27845445 http://dx.doi.org/10.1038/srep37111 |
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author | Christensen, Janni B. Soares da Costa, T. P. Faou, Pierre Pearce, F. Grant Panjikar, Santosh Perugini, Matthew A. |
author_facet | Christensen, Janni B. Soares da Costa, T. P. Faou, Pierre Pearce, F. Grant Panjikar, Santosh Perugini, Matthew A. |
author_sort | Christensen, Janni B. |
collection | PubMed |
description | Lysine biosynthesis in bacteria and plants commences with a condensation reaction catalysed by dihydrodipicolinate synthase (DHDPS) followed by a reduction reaction catalysed by dihydrodipicolinate reductase (DHDPR). Interestingly, both DHDPS and DHDPR exist as different oligomeric forms in bacteria and plants. DHDPS is primarily a homotetramer in all species, but the architecture of the tetramer differs across kingdoms. DHDPR also exists as a tetramer in bacteria, but has recently been reported to be dimeric in plants. This study aimed to characterise for the first time the structure and function of DHDPS and DHDPR from cyanobacteria, which is an evolutionary important phylum that evolved at the divergence point between bacteria and plants. We cloned, expressed and purified DHDPS and DHDPR from the cyanobacterium Anabaena variabilis. The recombinant enzymes were shown to be folded by circular dichroism spectroscopy, enzymatically active employing the quantitative DHDPS-DHDPR coupled assay, and form tetramers in solution using analytical ultracentrifugation. Crystal structures of DHDPS and DHDPR from A. variabilis were determined at 1.92 Å and 2.83 Å, respectively, and show that both enzymes adopt the canonical bacterial tetrameric architecture. These studies indicate that the quaternary structure of bacterial and plant DHDPS and DHDPR diverged after cyanobacteria evolved. |
format | Online Article Text |
id | pubmed-5109050 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-51090502016-11-25 Structure and Function of Cyanobacterial DHDPS and DHDPR Christensen, Janni B. Soares da Costa, T. P. Faou, Pierre Pearce, F. Grant Panjikar, Santosh Perugini, Matthew A. Sci Rep Article Lysine biosynthesis in bacteria and plants commences with a condensation reaction catalysed by dihydrodipicolinate synthase (DHDPS) followed by a reduction reaction catalysed by dihydrodipicolinate reductase (DHDPR). Interestingly, both DHDPS and DHDPR exist as different oligomeric forms in bacteria and plants. DHDPS is primarily a homotetramer in all species, but the architecture of the tetramer differs across kingdoms. DHDPR also exists as a tetramer in bacteria, but has recently been reported to be dimeric in plants. This study aimed to characterise for the first time the structure and function of DHDPS and DHDPR from cyanobacteria, which is an evolutionary important phylum that evolved at the divergence point between bacteria and plants. We cloned, expressed and purified DHDPS and DHDPR from the cyanobacterium Anabaena variabilis. The recombinant enzymes were shown to be folded by circular dichroism spectroscopy, enzymatically active employing the quantitative DHDPS-DHDPR coupled assay, and form tetramers in solution using analytical ultracentrifugation. Crystal structures of DHDPS and DHDPR from A. variabilis were determined at 1.92 Å and 2.83 Å, respectively, and show that both enzymes adopt the canonical bacterial tetrameric architecture. These studies indicate that the quaternary structure of bacterial and plant DHDPS and DHDPR diverged after cyanobacteria evolved. Nature Publishing Group 2016-11-15 /pmc/articles/PMC5109050/ /pubmed/27845445 http://dx.doi.org/10.1038/srep37111 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Christensen, Janni B. Soares da Costa, T. P. Faou, Pierre Pearce, F. Grant Panjikar, Santosh Perugini, Matthew A. Structure and Function of Cyanobacterial DHDPS and DHDPR |
title | Structure and Function of Cyanobacterial DHDPS and DHDPR |
title_full | Structure and Function of Cyanobacterial DHDPS and DHDPR |
title_fullStr | Structure and Function of Cyanobacterial DHDPS and DHDPR |
title_full_unstemmed | Structure and Function of Cyanobacterial DHDPS and DHDPR |
title_short | Structure and Function of Cyanobacterial DHDPS and DHDPR |
title_sort | structure and function of cyanobacterial dhdps and dhdpr |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5109050/ https://www.ncbi.nlm.nih.gov/pubmed/27845445 http://dx.doi.org/10.1038/srep37111 |
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