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Structure and Function of Cyanobacterial DHDPS and DHDPR

Lysine biosynthesis in bacteria and plants commences with a condensation reaction catalysed by dihydrodipicolinate synthase (DHDPS) followed by a reduction reaction catalysed by dihydrodipicolinate reductase (DHDPR). Interestingly, both DHDPS and DHDPR exist as different oligomeric forms in bacteria...

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Autores principales: Christensen, Janni B., Soares da Costa, T. P., Faou, Pierre, Pearce, F. Grant, Panjikar, Santosh, Perugini, Matthew A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5109050/
https://www.ncbi.nlm.nih.gov/pubmed/27845445
http://dx.doi.org/10.1038/srep37111
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author Christensen, Janni B.
Soares da Costa, T. P.
Faou, Pierre
Pearce, F. Grant
Panjikar, Santosh
Perugini, Matthew A.
author_facet Christensen, Janni B.
Soares da Costa, T. P.
Faou, Pierre
Pearce, F. Grant
Panjikar, Santosh
Perugini, Matthew A.
author_sort Christensen, Janni B.
collection PubMed
description Lysine biosynthesis in bacteria and plants commences with a condensation reaction catalysed by dihydrodipicolinate synthase (DHDPS) followed by a reduction reaction catalysed by dihydrodipicolinate reductase (DHDPR). Interestingly, both DHDPS and DHDPR exist as different oligomeric forms in bacteria and plants. DHDPS is primarily a homotetramer in all species, but the architecture of the tetramer differs across kingdoms. DHDPR also exists as a tetramer in bacteria, but has recently been reported to be dimeric in plants. This study aimed to characterise for the first time the structure and function of DHDPS and DHDPR from cyanobacteria, which is an evolutionary important phylum that evolved at the divergence point between bacteria and plants. We cloned, expressed and purified DHDPS and DHDPR from the cyanobacterium Anabaena variabilis. The recombinant enzymes were shown to be folded by circular dichroism spectroscopy, enzymatically active employing the quantitative DHDPS-DHDPR coupled assay, and form tetramers in solution using analytical ultracentrifugation. Crystal structures of DHDPS and DHDPR from A. variabilis were determined at 1.92 Å and 2.83 Å, respectively, and show that both enzymes adopt the canonical bacterial tetrameric architecture. These studies indicate that the quaternary structure of bacterial and plant DHDPS and DHDPR diverged after cyanobacteria evolved.
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spelling pubmed-51090502016-11-25 Structure and Function of Cyanobacterial DHDPS and DHDPR Christensen, Janni B. Soares da Costa, T. P. Faou, Pierre Pearce, F. Grant Panjikar, Santosh Perugini, Matthew A. Sci Rep Article Lysine biosynthesis in bacteria and plants commences with a condensation reaction catalysed by dihydrodipicolinate synthase (DHDPS) followed by a reduction reaction catalysed by dihydrodipicolinate reductase (DHDPR). Interestingly, both DHDPS and DHDPR exist as different oligomeric forms in bacteria and plants. DHDPS is primarily a homotetramer in all species, but the architecture of the tetramer differs across kingdoms. DHDPR also exists as a tetramer in bacteria, but has recently been reported to be dimeric in plants. This study aimed to characterise for the first time the structure and function of DHDPS and DHDPR from cyanobacteria, which is an evolutionary important phylum that evolved at the divergence point between bacteria and plants. We cloned, expressed and purified DHDPS and DHDPR from the cyanobacterium Anabaena variabilis. The recombinant enzymes were shown to be folded by circular dichroism spectroscopy, enzymatically active employing the quantitative DHDPS-DHDPR coupled assay, and form tetramers in solution using analytical ultracentrifugation. Crystal structures of DHDPS and DHDPR from A. variabilis were determined at 1.92 Å and 2.83 Å, respectively, and show that both enzymes adopt the canonical bacterial tetrameric architecture. These studies indicate that the quaternary structure of bacterial and plant DHDPS and DHDPR diverged after cyanobacteria evolved. Nature Publishing Group 2016-11-15 /pmc/articles/PMC5109050/ /pubmed/27845445 http://dx.doi.org/10.1038/srep37111 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Christensen, Janni B.
Soares da Costa, T. P.
Faou, Pierre
Pearce, F. Grant
Panjikar, Santosh
Perugini, Matthew A.
Structure and Function of Cyanobacterial DHDPS and DHDPR
title Structure and Function of Cyanobacterial DHDPS and DHDPR
title_full Structure and Function of Cyanobacterial DHDPS and DHDPR
title_fullStr Structure and Function of Cyanobacterial DHDPS and DHDPR
title_full_unstemmed Structure and Function of Cyanobacterial DHDPS and DHDPR
title_short Structure and Function of Cyanobacterial DHDPS and DHDPR
title_sort structure and function of cyanobacterial dhdps and dhdpr
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5109050/
https://www.ncbi.nlm.nih.gov/pubmed/27845445
http://dx.doi.org/10.1038/srep37111
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