Cargando…

Implementing informative priors for heterogeneity in meta‐analysis using meta‐regression and pseudo data

Many meta‐analyses combine results from only a small number of studies, a situation in which the between‐study variance is imprecisely estimated when standard methods are applied. Bayesian meta‐analysis allows incorporation of external evidence on heterogeneity, providing the potential for more robu...

Descripción completa

Detalles Bibliográficos
Autores principales: Rhodes, Kirsty M., Turner, Rebecca M., White, Ian R., Jackson, Dan, Spiegelhalter, David J., Higgins, Julian P. T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5111594/
https://www.ncbi.nlm.nih.gov/pubmed/27577523
http://dx.doi.org/10.1002/sim.7090
_version_ 1782467892537720832
author Rhodes, Kirsty M.
Turner, Rebecca M.
White, Ian R.
Jackson, Dan
Spiegelhalter, David J.
Higgins, Julian P. T.
author_facet Rhodes, Kirsty M.
Turner, Rebecca M.
White, Ian R.
Jackson, Dan
Spiegelhalter, David J.
Higgins, Julian P. T.
author_sort Rhodes, Kirsty M.
collection PubMed
description Many meta‐analyses combine results from only a small number of studies, a situation in which the between‐study variance is imprecisely estimated when standard methods are applied. Bayesian meta‐analysis allows incorporation of external evidence on heterogeneity, providing the potential for more robust inference on the effect size of interest. We present a method for performing Bayesian meta‐analysis using data augmentation, in which we represent an informative conjugate prior for between‐study variance by pseudo data and use meta‐regression for estimation. To assist in this, we derive predictive inverse‐gamma distributions for the between‐study variance expected in future meta‐analyses. These may serve as priors for heterogeneity in new meta‐analyses. In a simulation study, we compare approximate Bayesian methods using meta‐regression and pseudo data against fully Bayesian approaches based on importance sampling techniques and Markov chain Monte Carlo (MCMC). We compare the frequentist properties of these Bayesian methods with those of the commonly used frequentist DerSimonian and Laird procedure. The method is implemented in standard statistical software and provides a less complex alternative to standard MCMC approaches. An importance sampling approach produces almost identical results to standard MCMC approaches, and results obtained through meta‐regression and pseudo data are very similar. On average, data augmentation provides closer results to MCMC, if implemented using restricted maximum likelihood estimation rather than DerSimonian and Laird or maximum likelihood estimation. The methods are applied to real datasets, and an extension to network meta‐analysis is described. The proposed method facilitates Bayesian meta‐analysis in a way that is accessible to applied researchers. © 2016 The Authors. Statistics in Medicine Published by John Wiley & Sons Ltd.
format Online
Article
Text
id pubmed-5111594
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-51115942016-11-16 Implementing informative priors for heterogeneity in meta‐analysis using meta‐regression and pseudo data Rhodes, Kirsty M. Turner, Rebecca M. White, Ian R. Jackson, Dan Spiegelhalter, David J. Higgins, Julian P. T. Stat Med Research Articles Many meta‐analyses combine results from only a small number of studies, a situation in which the between‐study variance is imprecisely estimated when standard methods are applied. Bayesian meta‐analysis allows incorporation of external evidence on heterogeneity, providing the potential for more robust inference on the effect size of interest. We present a method for performing Bayesian meta‐analysis using data augmentation, in which we represent an informative conjugate prior for between‐study variance by pseudo data and use meta‐regression for estimation. To assist in this, we derive predictive inverse‐gamma distributions for the between‐study variance expected in future meta‐analyses. These may serve as priors for heterogeneity in new meta‐analyses. In a simulation study, we compare approximate Bayesian methods using meta‐regression and pseudo data against fully Bayesian approaches based on importance sampling techniques and Markov chain Monte Carlo (MCMC). We compare the frequentist properties of these Bayesian methods with those of the commonly used frequentist DerSimonian and Laird procedure. The method is implemented in standard statistical software and provides a less complex alternative to standard MCMC approaches. An importance sampling approach produces almost identical results to standard MCMC approaches, and results obtained through meta‐regression and pseudo data are very similar. On average, data augmentation provides closer results to MCMC, if implemented using restricted maximum likelihood estimation rather than DerSimonian and Laird or maximum likelihood estimation. The methods are applied to real datasets, and an extension to network meta‐analysis is described. The proposed method facilitates Bayesian meta‐analysis in a way that is accessible to applied researchers. © 2016 The Authors. Statistics in Medicine Published by John Wiley & Sons Ltd. John Wiley and Sons Inc. 2016-08-30 2016-12-20 /pmc/articles/PMC5111594/ /pubmed/27577523 http://dx.doi.org/10.1002/sim.7090 Text en © 2016 The Authors. Statistics in Medicine Published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Rhodes, Kirsty M.
Turner, Rebecca M.
White, Ian R.
Jackson, Dan
Spiegelhalter, David J.
Higgins, Julian P. T.
Implementing informative priors for heterogeneity in meta‐analysis using meta‐regression and pseudo data
title Implementing informative priors for heterogeneity in meta‐analysis using meta‐regression and pseudo data
title_full Implementing informative priors for heterogeneity in meta‐analysis using meta‐regression and pseudo data
title_fullStr Implementing informative priors for heterogeneity in meta‐analysis using meta‐regression and pseudo data
title_full_unstemmed Implementing informative priors for heterogeneity in meta‐analysis using meta‐regression and pseudo data
title_short Implementing informative priors for heterogeneity in meta‐analysis using meta‐regression and pseudo data
title_sort implementing informative priors for heterogeneity in meta‐analysis using meta‐regression and pseudo data
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5111594/
https://www.ncbi.nlm.nih.gov/pubmed/27577523
http://dx.doi.org/10.1002/sim.7090
work_keys_str_mv AT rhodeskirstym implementinginformativepriorsforheterogeneityinmetaanalysisusingmetaregressionandpseudodata
AT turnerrebeccam implementinginformativepriorsforheterogeneityinmetaanalysisusingmetaregressionandpseudodata
AT whiteianr implementinginformativepriorsforheterogeneityinmetaanalysisusingmetaregressionandpseudodata
AT jacksondan implementinginformativepriorsforheterogeneityinmetaanalysisusingmetaregressionandpseudodata
AT spiegelhalterdavidj implementinginformativepriorsforheterogeneityinmetaanalysisusingmetaregressionandpseudodata
AT higginsjulianpt implementinginformativepriorsforheterogeneityinmetaanalysisusingmetaregressionandpseudodata