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Temperature Sensitivity as a Microbial Trait Using Parameters from Macromolecular Rate Theory
The activity of soil microbial extracellular enzymes is strongly controlled by temperature, yet the degree to which temperature sensitivity varies by microbe and enzyme type is unclear. Such information would allow soil microbial enzymes to be incorporated in a traits-based framework to improve pred...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5112240/ https://www.ncbi.nlm.nih.gov/pubmed/27909429 http://dx.doi.org/10.3389/fmicb.2016.01821 |
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author | Alster, Charlotte J. Baas, Peter Wallenstein, Matthew D. Johnson, Nels G. von Fischer, Joseph C. |
author_facet | Alster, Charlotte J. Baas, Peter Wallenstein, Matthew D. Johnson, Nels G. von Fischer, Joseph C. |
author_sort | Alster, Charlotte J. |
collection | PubMed |
description | The activity of soil microbial extracellular enzymes is strongly controlled by temperature, yet the degree to which temperature sensitivity varies by microbe and enzyme type is unclear. Such information would allow soil microbial enzymes to be incorporated in a traits-based framework to improve prediction of ecosystem response to global change. If temperature sensitivity varies for specific soil enzymes, then determining the underlying causes of variation in temperature sensitivity of these enzymes will provide fundamental insights for predicting nutrient dynamics belowground. In this study, we characterized how both microbial taxonomic variation as well as substrate type affects temperature sensitivity. We measured β-glucosidase, leucine aminopeptidase, and phosphatase activities at six temperatures: 4, 11, 25, 35, 45, and 60°C, for seven different soil microbial isolates. To calculate temperature sensitivity, we employed two models, Arrhenius, which predicts an exponential increase in reaction rate with temperature, and Macromolecular Rate Theory (MMRT), which predicts rate to peak and then decline as temperature increases. We found MMRT provided a more accurate fit and allowed for more nuanced interpretation of temperature sensitivity in all of the enzyme × isolate combinations tested. Our results revealed that both the enzyme type and soil isolate type explain variation in parameters associated with temperature sensitivity. Because we found temperature sensitivity to be an inherent and variable property of an enzyme, we argue that it can be incorporated as a microbial functional trait, but only when using the MMRT definition of temperature sensitivity. We show that the Arrhenius metrics of temperature sensitivity are overly sensitive to test conditions, with activation energy changing depending on the temperature range it was calculated within. Thus, we propose the use of the MMRT definition of temperature sensitivity for accurate interpretation of temperature sensitivity of soil microbial enzymes. |
format | Online Article Text |
id | pubmed-5112240 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-51122402016-12-01 Temperature Sensitivity as a Microbial Trait Using Parameters from Macromolecular Rate Theory Alster, Charlotte J. Baas, Peter Wallenstein, Matthew D. Johnson, Nels G. von Fischer, Joseph C. Front Microbiol Microbiology The activity of soil microbial extracellular enzymes is strongly controlled by temperature, yet the degree to which temperature sensitivity varies by microbe and enzyme type is unclear. Such information would allow soil microbial enzymes to be incorporated in a traits-based framework to improve prediction of ecosystem response to global change. If temperature sensitivity varies for specific soil enzymes, then determining the underlying causes of variation in temperature sensitivity of these enzymes will provide fundamental insights for predicting nutrient dynamics belowground. In this study, we characterized how both microbial taxonomic variation as well as substrate type affects temperature sensitivity. We measured β-glucosidase, leucine aminopeptidase, and phosphatase activities at six temperatures: 4, 11, 25, 35, 45, and 60°C, for seven different soil microbial isolates. To calculate temperature sensitivity, we employed two models, Arrhenius, which predicts an exponential increase in reaction rate with temperature, and Macromolecular Rate Theory (MMRT), which predicts rate to peak and then decline as temperature increases. We found MMRT provided a more accurate fit and allowed for more nuanced interpretation of temperature sensitivity in all of the enzyme × isolate combinations tested. Our results revealed that both the enzyme type and soil isolate type explain variation in parameters associated with temperature sensitivity. Because we found temperature sensitivity to be an inherent and variable property of an enzyme, we argue that it can be incorporated as a microbial functional trait, but only when using the MMRT definition of temperature sensitivity. We show that the Arrhenius metrics of temperature sensitivity are overly sensitive to test conditions, with activation energy changing depending on the temperature range it was calculated within. Thus, we propose the use of the MMRT definition of temperature sensitivity for accurate interpretation of temperature sensitivity of soil microbial enzymes. Frontiers Media S.A. 2016-11-17 /pmc/articles/PMC5112240/ /pubmed/27909429 http://dx.doi.org/10.3389/fmicb.2016.01821 Text en Copyright © 2016 Alster, Baas, Wallenstein, Johnson and von Fischer. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Alster, Charlotte J. Baas, Peter Wallenstein, Matthew D. Johnson, Nels G. von Fischer, Joseph C. Temperature Sensitivity as a Microbial Trait Using Parameters from Macromolecular Rate Theory |
title | Temperature Sensitivity as a Microbial Trait Using Parameters from Macromolecular Rate Theory |
title_full | Temperature Sensitivity as a Microbial Trait Using Parameters from Macromolecular Rate Theory |
title_fullStr | Temperature Sensitivity as a Microbial Trait Using Parameters from Macromolecular Rate Theory |
title_full_unstemmed | Temperature Sensitivity as a Microbial Trait Using Parameters from Macromolecular Rate Theory |
title_short | Temperature Sensitivity as a Microbial Trait Using Parameters from Macromolecular Rate Theory |
title_sort | temperature sensitivity as a microbial trait using parameters from macromolecular rate theory |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5112240/ https://www.ncbi.nlm.nih.gov/pubmed/27909429 http://dx.doi.org/10.3389/fmicb.2016.01821 |
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