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Classification of Parkinson’s disease utilizing multi-edit nearest-neighbor and ensemble learning algorithms with speech samples

BACKGROUND: The use of speech based data in the classification of Parkinson disease (PD) has been shown to provide an effect, non-invasive mode of classification in recent years. Thus, there has been an increased interest in speech pattern analysis methods applicable to Parkinsonism for building pre...

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Autores principales: Zhang, He-Hua, Yang, Liuyang, Liu, Yuchuan, Wang, Pin, Yin, Jun, Li, Yongming, Qiu, Mingguo, Zhu, Xueru, Yan, Fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5112697/
https://www.ncbi.nlm.nih.gov/pubmed/27852279
http://dx.doi.org/10.1186/s12938-016-0242-6
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author Zhang, He-Hua
Yang, Liuyang
Liu, Yuchuan
Wang, Pin
Yin, Jun
Li, Yongming
Qiu, Mingguo
Zhu, Xueru
Yan, Fang
author_facet Zhang, He-Hua
Yang, Liuyang
Liu, Yuchuan
Wang, Pin
Yin, Jun
Li, Yongming
Qiu, Mingguo
Zhu, Xueru
Yan, Fang
author_sort Zhang, He-Hua
collection PubMed
description BACKGROUND: The use of speech based data in the classification of Parkinson disease (PD) has been shown to provide an effect, non-invasive mode of classification in recent years. Thus, there has been an increased interest in speech pattern analysis methods applicable to Parkinsonism for building predictive tele-diagnosis and tele-monitoring models. One of the obstacles in optimizing classifications is to reduce noise within the collected speech samples, thus ensuring better classification accuracy and stability. While the currently used methods are effect, the ability to invoke instance selection has been seldomly examined. METHODS: In this study, a PD classification algorithm was proposed and examined that combines a multi-edit-nearest-neighbor (MENN) algorithm and an ensemble learning algorithm. First, the MENN algorithm is applied for selecting optimal training speech samples iteratively, thereby obtaining samples with high separability. Next, an ensemble learning algorithm, random forest (RF) or decorrelated neural network ensembles (DNNE), is used to generate trained samples from the collected training samples. Lastly, the trained ensemble learning algorithms are applied to the test samples for PD classification. This proposed method was examined using a more recently deposited public datasets and compared against other currently used algorithms for validation. RESULTS: Experimental results showed that the proposed algorithm obtained the highest degree of improved classification accuracy (29.44%) compared with the other algorithm that was examined. Furthermore, the MENN algorithm alone was found to improve classification accuracy by as much as 45.72%. Moreover, the proposed algorithm was found to exhibit a higher stability, particularly when combining the MENN and RF algorithms. CONCLUSIONS: This study showed that the proposed method could improve PD classification when using speech data and can be applied to future studies seeking to improve PD classification methods.
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spelling pubmed-51126972016-11-23 Classification of Parkinson’s disease utilizing multi-edit nearest-neighbor and ensemble learning algorithms with speech samples Zhang, He-Hua Yang, Liuyang Liu, Yuchuan Wang, Pin Yin, Jun Li, Yongming Qiu, Mingguo Zhu, Xueru Yan, Fang Biomed Eng Online Research BACKGROUND: The use of speech based data in the classification of Parkinson disease (PD) has been shown to provide an effect, non-invasive mode of classification in recent years. Thus, there has been an increased interest in speech pattern analysis methods applicable to Parkinsonism for building predictive tele-diagnosis and tele-monitoring models. One of the obstacles in optimizing classifications is to reduce noise within the collected speech samples, thus ensuring better classification accuracy and stability. While the currently used methods are effect, the ability to invoke instance selection has been seldomly examined. METHODS: In this study, a PD classification algorithm was proposed and examined that combines a multi-edit-nearest-neighbor (MENN) algorithm and an ensemble learning algorithm. First, the MENN algorithm is applied for selecting optimal training speech samples iteratively, thereby obtaining samples with high separability. Next, an ensemble learning algorithm, random forest (RF) or decorrelated neural network ensembles (DNNE), is used to generate trained samples from the collected training samples. Lastly, the trained ensemble learning algorithms are applied to the test samples for PD classification. This proposed method was examined using a more recently deposited public datasets and compared against other currently used algorithms for validation. RESULTS: Experimental results showed that the proposed algorithm obtained the highest degree of improved classification accuracy (29.44%) compared with the other algorithm that was examined. Furthermore, the MENN algorithm alone was found to improve classification accuracy by as much as 45.72%. Moreover, the proposed algorithm was found to exhibit a higher stability, particularly when combining the MENN and RF algorithms. CONCLUSIONS: This study showed that the proposed method could improve PD classification when using speech data and can be applied to future studies seeking to improve PD classification methods. BioMed Central 2016-11-16 /pmc/articles/PMC5112697/ /pubmed/27852279 http://dx.doi.org/10.1186/s12938-016-0242-6 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Zhang, He-Hua
Yang, Liuyang
Liu, Yuchuan
Wang, Pin
Yin, Jun
Li, Yongming
Qiu, Mingguo
Zhu, Xueru
Yan, Fang
Classification of Parkinson’s disease utilizing multi-edit nearest-neighbor and ensemble learning algorithms with speech samples
title Classification of Parkinson’s disease utilizing multi-edit nearest-neighbor and ensemble learning algorithms with speech samples
title_full Classification of Parkinson’s disease utilizing multi-edit nearest-neighbor and ensemble learning algorithms with speech samples
title_fullStr Classification of Parkinson’s disease utilizing multi-edit nearest-neighbor and ensemble learning algorithms with speech samples
title_full_unstemmed Classification of Parkinson’s disease utilizing multi-edit nearest-neighbor and ensemble learning algorithms with speech samples
title_short Classification of Parkinson’s disease utilizing multi-edit nearest-neighbor and ensemble learning algorithms with speech samples
title_sort classification of parkinson’s disease utilizing multi-edit nearest-neighbor and ensemble learning algorithms with speech samples
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5112697/
https://www.ncbi.nlm.nih.gov/pubmed/27852279
http://dx.doi.org/10.1186/s12938-016-0242-6
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