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2-Aryl-5-carboxytetrazole as a New Photoaffinity Label for Drug Target Identification
[Image: see text] Photoaffinity labels are powerful tools for dissecting ligand–protein interactions, and they have a broad utility in medicinal chemistry and drug discovery. Traditional photoaffinity labels work through nonspecific C–H/X–H bond insertion reactions with the protein of interest by th...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5115731/ https://www.ncbi.nlm.nih.gov/pubmed/27740749 http://dx.doi.org/10.1021/jacs.6b06645 |
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author | Herner, András Marjanovic, Jasmina Lewandowski, Tracey M. Marin, Violeta Patterson, Melanie Miesbauer, Laura Ready, Damien Williams, Jon Vasudevan, Anil Lin, Qing |
author_facet | Herner, András Marjanovic, Jasmina Lewandowski, Tracey M. Marin, Violeta Patterson, Melanie Miesbauer, Laura Ready, Damien Williams, Jon Vasudevan, Anil Lin, Qing |
author_sort | Herner, András |
collection | PubMed |
description | [Image: see text] Photoaffinity labels are powerful tools for dissecting ligand–protein interactions, and they have a broad utility in medicinal chemistry and drug discovery. Traditional photoaffinity labels work through nonspecific C–H/X–H bond insertion reactions with the protein of interest by the highly reactive photogenerated intermediate. Herein, we report a new photoaffinity label, 2-aryl-5-carboxytetrazole (ACT), that interacts with the target protein via a unique mechanism in which the photogenerated carboxynitrile imine reacts with a proximal nucleophile near the target active site. In two distinct case studies, we demonstrate that the attachment of ACT to a ligand does not significantly alter the binding affinity and specificity of the parent drug. Compared with diazirine and benzophenone, two commonly used photoaffinity labels, in two case studies ACT showed higher photo-cross-linking yields toward their protein targets in vitro based on mass spectrometry analysis. In the in situ target identification studies, ACT successfully captured the desired targets with an efficiency comparable to the diazirine. We expect that further development of this class of photoaffinity labels will lead to a broad range of applications across target identification, and validation and elucidation of the binding site in drug discovery. |
format | Online Article Text |
id | pubmed-5115731 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-51157312016-11-21 2-Aryl-5-carboxytetrazole as a New Photoaffinity Label for Drug Target Identification Herner, András Marjanovic, Jasmina Lewandowski, Tracey M. Marin, Violeta Patterson, Melanie Miesbauer, Laura Ready, Damien Williams, Jon Vasudevan, Anil Lin, Qing J Am Chem Soc [Image: see text] Photoaffinity labels are powerful tools for dissecting ligand–protein interactions, and they have a broad utility in medicinal chemistry and drug discovery. Traditional photoaffinity labels work through nonspecific C–H/X–H bond insertion reactions with the protein of interest by the highly reactive photogenerated intermediate. Herein, we report a new photoaffinity label, 2-aryl-5-carboxytetrazole (ACT), that interacts with the target protein via a unique mechanism in which the photogenerated carboxynitrile imine reacts with a proximal nucleophile near the target active site. In two distinct case studies, we demonstrate that the attachment of ACT to a ligand does not significantly alter the binding affinity and specificity of the parent drug. Compared with diazirine and benzophenone, two commonly used photoaffinity labels, in two case studies ACT showed higher photo-cross-linking yields toward their protein targets in vitro based on mass spectrometry analysis. In the in situ target identification studies, ACT successfully captured the desired targets with an efficiency comparable to the diazirine. We expect that further development of this class of photoaffinity labels will lead to a broad range of applications across target identification, and validation and elucidation of the binding site in drug discovery. American Chemical Society 2016-10-14 2016-11-09 /pmc/articles/PMC5115731/ /pubmed/27740749 http://dx.doi.org/10.1021/jacs.6b06645 Text en Copyright © 2016 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Herner, András Marjanovic, Jasmina Lewandowski, Tracey M. Marin, Violeta Patterson, Melanie Miesbauer, Laura Ready, Damien Williams, Jon Vasudevan, Anil Lin, Qing 2-Aryl-5-carboxytetrazole as a New Photoaffinity Label for Drug Target Identification |
title | 2-Aryl-5-carboxytetrazole
as a New Photoaffinity
Label for Drug Target Identification |
title_full | 2-Aryl-5-carboxytetrazole
as a New Photoaffinity
Label for Drug Target Identification |
title_fullStr | 2-Aryl-5-carboxytetrazole
as a New Photoaffinity
Label for Drug Target Identification |
title_full_unstemmed | 2-Aryl-5-carboxytetrazole
as a New Photoaffinity
Label for Drug Target Identification |
title_short | 2-Aryl-5-carboxytetrazole
as a New Photoaffinity
Label for Drug Target Identification |
title_sort | 2-aryl-5-carboxytetrazole
as a new photoaffinity
label for drug target identification |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5115731/ https://www.ncbi.nlm.nih.gov/pubmed/27740749 http://dx.doi.org/10.1021/jacs.6b06645 |
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