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Exploring Canadian Echinoderm Diversity through DNA Barcodes
DNA barcoding has proven an effective tool for species identification in varied groups of marine invertebrates including crustaceans, molluscs, polychaetes and echinoderms. In this study, we further validate its utility by analyzing almost half of the 300 species of Echinodermata known from Canadian...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5117606/ https://www.ncbi.nlm.nih.gov/pubmed/27870868 http://dx.doi.org/10.1371/journal.pone.0166118 |
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author | Layton, Kara K. S. Corstorphine, Erin A. Hebert, Paul D. N. |
author_facet | Layton, Kara K. S. Corstorphine, Erin A. Hebert, Paul D. N. |
author_sort | Layton, Kara K. S. |
collection | PubMed |
description | DNA barcoding has proven an effective tool for species identification in varied groups of marine invertebrates including crustaceans, molluscs, polychaetes and echinoderms. In this study, we further validate its utility by analyzing almost half of the 300 species of Echinodermata known from Canadian waters. COI sequences from 999 specimens were assigned to 145 BINs. In most cases, species discrimination was straightforward due to the large difference (25-fold) between mean intra- (0.48%) and inter- (12.0%) specific divergence. Six species were flagged for further taxonomic investigation because specimens assigned to them fell into two or three discrete sequence clusters. The potential influence of larval dispersal capacity and glacial events on patterns of genetic diversity is discussed for 19 trans-oceanic species. Although additional research is needed to clarify biogeographic patterns and resolve taxonomic questions, this study represents an important step in the assembly of a DNA barcode library for all Canadian echinoderms, a valuable resource for future biosurveillance programs. |
format | Online Article Text |
id | pubmed-5117606 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-51176062016-12-15 Exploring Canadian Echinoderm Diversity through DNA Barcodes Layton, Kara K. S. Corstorphine, Erin A. Hebert, Paul D. N. PLoS One Research Article DNA barcoding has proven an effective tool for species identification in varied groups of marine invertebrates including crustaceans, molluscs, polychaetes and echinoderms. In this study, we further validate its utility by analyzing almost half of the 300 species of Echinodermata known from Canadian waters. COI sequences from 999 specimens were assigned to 145 BINs. In most cases, species discrimination was straightforward due to the large difference (25-fold) between mean intra- (0.48%) and inter- (12.0%) specific divergence. Six species were flagged for further taxonomic investigation because specimens assigned to them fell into two or three discrete sequence clusters. The potential influence of larval dispersal capacity and glacial events on patterns of genetic diversity is discussed for 19 trans-oceanic species. Although additional research is needed to clarify biogeographic patterns and resolve taxonomic questions, this study represents an important step in the assembly of a DNA barcode library for all Canadian echinoderms, a valuable resource for future biosurveillance programs. Public Library of Science 2016-11-21 /pmc/articles/PMC5117606/ /pubmed/27870868 http://dx.doi.org/10.1371/journal.pone.0166118 Text en © 2016 Layton et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Layton, Kara K. S. Corstorphine, Erin A. Hebert, Paul D. N. Exploring Canadian Echinoderm Diversity through DNA Barcodes |
title | Exploring Canadian Echinoderm Diversity through DNA Barcodes |
title_full | Exploring Canadian Echinoderm Diversity through DNA Barcodes |
title_fullStr | Exploring Canadian Echinoderm Diversity through DNA Barcodes |
title_full_unstemmed | Exploring Canadian Echinoderm Diversity through DNA Barcodes |
title_short | Exploring Canadian Echinoderm Diversity through DNA Barcodes |
title_sort | exploring canadian echinoderm diversity through dna barcodes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5117606/ https://www.ncbi.nlm.nih.gov/pubmed/27870868 http://dx.doi.org/10.1371/journal.pone.0166118 |
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