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Exploring Spatio-temporal Dynamics of Cellular Automata for Pattern Recognition in Networks

Network science is an interdisciplinary field which provides an integrative approach for the study of complex systems. In recent years, network modeling has been used for the study of emergent phenomena in many real-world applications. Pattern recognition in networks has been drawing attention to th...

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Autores principales: Miranda, Gisele Helena Barboni, Machicao, Jeaneth, Bruno, Odemir Martinez
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5118793/
https://www.ncbi.nlm.nih.gov/pubmed/27874024
http://dx.doi.org/10.1038/srep37329
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author Miranda, Gisele Helena Barboni
Machicao, Jeaneth
Bruno, Odemir Martinez
author_facet Miranda, Gisele Helena Barboni
Machicao, Jeaneth
Bruno, Odemir Martinez
author_sort Miranda, Gisele Helena Barboni
collection PubMed
description Network science is an interdisciplinary field which provides an integrative approach for the study of complex systems. In recent years, network modeling has been used for the study of emergent phenomena in many real-world applications. Pattern recognition in networks has been drawing attention to the importance of network characterization, which may lead to understanding the topological properties that are related to the network model. In this paper, the Life-Like Network Automata (LLNA) method is introduced, which was designed for pattern recognition in networks. LLNA uses the network topology as a tessellation of Cellular Automata (CA), whose dynamics produces a spatio-temporal pattern used to extract the feature vector for network characterization. The method was evaluated using synthetic and real-world networks. In the latter, three pattern recognition applications were used: (i) identifying organisms from distinct domains of life through their metabolic networks, (ii) identifying online social networks and (iii) classifying stomata distribution patterns varying according to different lighting conditions. LLNA was compared to structural measurements and surpasses them in real-world applications, achieving improvement in the classification rate as high as 23%, 4% and 7% respectively. Therefore, the proposed method is a good choice for pattern recognition applications using networks and demonstrates potential for general applicability.
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spelling pubmed-51187932016-11-28 Exploring Spatio-temporal Dynamics of Cellular Automata for Pattern Recognition in Networks Miranda, Gisele Helena Barboni Machicao, Jeaneth Bruno, Odemir Martinez Sci Rep Article Network science is an interdisciplinary field which provides an integrative approach for the study of complex systems. In recent years, network modeling has been used for the study of emergent phenomena in many real-world applications. Pattern recognition in networks has been drawing attention to the importance of network characterization, which may lead to understanding the topological properties that are related to the network model. In this paper, the Life-Like Network Automata (LLNA) method is introduced, which was designed for pattern recognition in networks. LLNA uses the network topology as a tessellation of Cellular Automata (CA), whose dynamics produces a spatio-temporal pattern used to extract the feature vector for network characterization. The method was evaluated using synthetic and real-world networks. In the latter, three pattern recognition applications were used: (i) identifying organisms from distinct domains of life through their metabolic networks, (ii) identifying online social networks and (iii) classifying stomata distribution patterns varying according to different lighting conditions. LLNA was compared to structural measurements and surpasses them in real-world applications, achieving improvement in the classification rate as high as 23%, 4% and 7% respectively. Therefore, the proposed method is a good choice for pattern recognition applications using networks and demonstrates potential for general applicability. Nature Publishing Group 2016-11-22 /pmc/articles/PMC5118793/ /pubmed/27874024 http://dx.doi.org/10.1038/srep37329 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Miranda, Gisele Helena Barboni
Machicao, Jeaneth
Bruno, Odemir Martinez
Exploring Spatio-temporal Dynamics of Cellular Automata for Pattern Recognition in Networks
title Exploring Spatio-temporal Dynamics of Cellular Automata for Pattern Recognition in Networks
title_full Exploring Spatio-temporal Dynamics of Cellular Automata for Pattern Recognition in Networks
title_fullStr Exploring Spatio-temporal Dynamics of Cellular Automata for Pattern Recognition in Networks
title_full_unstemmed Exploring Spatio-temporal Dynamics of Cellular Automata for Pattern Recognition in Networks
title_short Exploring Spatio-temporal Dynamics of Cellular Automata for Pattern Recognition in Networks
title_sort exploring spatio-temporal dynamics of cellular automata for pattern recognition in networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5118793/
https://www.ncbi.nlm.nih.gov/pubmed/27874024
http://dx.doi.org/10.1038/srep37329
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