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Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium

Assigning ecological roles to bacterial taxa remains imperative to understanding how microbial communities will respond to changing environmental conditions. Here we analyze the genus Curtobacterium, as it was found to be the most abundant taxon in a leaf litter community in southern California. Tra...

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Autores principales: Chase, Alexander B., Arevalo, Philip, Polz, Martin F., Berlemont, Renaud, Martiny, Jennifer B. H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5118839/
https://www.ncbi.nlm.nih.gov/pubmed/27920771
http://dx.doi.org/10.3389/fmicb.2016.01874
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author Chase, Alexander B.
Arevalo, Philip
Polz, Martin F.
Berlemont, Renaud
Martiny, Jennifer B. H.
author_facet Chase, Alexander B.
Arevalo, Philip
Polz, Martin F.
Berlemont, Renaud
Martiny, Jennifer B. H.
author_sort Chase, Alexander B.
collection PubMed
description Assigning ecological roles to bacterial taxa remains imperative to understanding how microbial communities will respond to changing environmental conditions. Here we analyze the genus Curtobacterium, as it was found to be the most abundant taxon in a leaf litter community in southern California. Traditional characterization of this taxon predominantly associates it as the causal pathogen in the agricultural crops of dry beans. Therefore, we sought to investigate whether the abundance of this genus was because of its role as a plant pathogen or another ecological role. By collating >24,000 16S rRNA sequences with 120 genomes across the Microbacteriaceae family, we show that Curtobacterium has a global distribution with a predominant presence in soil ecosystems. Moreover, this genus harbors a high diversity of genomic potential for the degradation of carbohydrates, specifically with regards to structural polysaccharides. We conclude that Curtobacterium may be responsible for the degradation of organic matter within litter communities.
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spelling pubmed-51188392016-12-05 Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium Chase, Alexander B. Arevalo, Philip Polz, Martin F. Berlemont, Renaud Martiny, Jennifer B. H. Front Microbiol Microbiology Assigning ecological roles to bacterial taxa remains imperative to understanding how microbial communities will respond to changing environmental conditions. Here we analyze the genus Curtobacterium, as it was found to be the most abundant taxon in a leaf litter community in southern California. Traditional characterization of this taxon predominantly associates it as the causal pathogen in the agricultural crops of dry beans. Therefore, we sought to investigate whether the abundance of this genus was because of its role as a plant pathogen or another ecological role. By collating >24,000 16S rRNA sequences with 120 genomes across the Microbacteriaceae family, we show that Curtobacterium has a global distribution with a predominant presence in soil ecosystems. Moreover, this genus harbors a high diversity of genomic potential for the degradation of carbohydrates, specifically with regards to structural polysaccharides. We conclude that Curtobacterium may be responsible for the degradation of organic matter within litter communities. Frontiers Media S.A. 2016-11-22 /pmc/articles/PMC5118839/ /pubmed/27920771 http://dx.doi.org/10.3389/fmicb.2016.01874 Text en Copyright © 2016 Chase, Arevalo, Polz, Berlemont and Martiny. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Chase, Alexander B.
Arevalo, Philip
Polz, Martin F.
Berlemont, Renaud
Martiny, Jennifer B. H.
Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium
title Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium
title_full Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium
title_fullStr Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium
title_full_unstemmed Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium
title_short Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium
title_sort evidence for ecological flexibility in the cosmopolitan genus curtobacterium
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5118839/
https://www.ncbi.nlm.nih.gov/pubmed/27920771
http://dx.doi.org/10.3389/fmicb.2016.01874
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