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Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer
Pancreatic cancer is a serious disease that results in more than thirty thousand deaths around the world per year. To design effective treatments, many investigators have devoted themselves to the study of biological processes and mechanisms underlying this disease. However, it is far from complete....
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120232/ https://www.ncbi.nlm.nih.gov/pubmed/27957501 http://dx.doi.org/10.1155/2016/7861274 |
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author | Yin, Hang Wang, ShaoPeng Zhang, Yu-Hang Cai, Yu-Dong Liu, Hailin |
author_facet | Yin, Hang Wang, ShaoPeng Zhang, Yu-Hang Cai, Yu-Dong Liu, Hailin |
author_sort | Yin, Hang |
collection | PubMed |
description | Pancreatic cancer is a serious disease that results in more than thirty thousand deaths around the world per year. To design effective treatments, many investigators have devoted themselves to the study of biological processes and mechanisms underlying this disease. However, it is far from complete. In this study, we tried to extract important gene ontology (GO) terms and KEGG pathways for pancreatic cancer by adopting some existing computational methods. Genes that have been validated to be related to pancreatic cancer and have not been validated were represented by features derived from GO terms and KEGG pathways using the enrichment theory. A popular feature selection method, minimum redundancy maximum relevance, was employed to analyze these features and extract important GO terms and KEGG pathways. An extensive analysis of the obtained GO terms and KEGG pathways was provided to confirm the correlations between them and pancreatic cancer. |
format | Online Article Text |
id | pubmed-5120232 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-51202322016-12-12 Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer Yin, Hang Wang, ShaoPeng Zhang, Yu-Hang Cai, Yu-Dong Liu, Hailin Biomed Res Int Research Article Pancreatic cancer is a serious disease that results in more than thirty thousand deaths around the world per year. To design effective treatments, many investigators have devoted themselves to the study of biological processes and mechanisms underlying this disease. However, it is far from complete. In this study, we tried to extract important gene ontology (GO) terms and KEGG pathways for pancreatic cancer by adopting some existing computational methods. Genes that have been validated to be related to pancreatic cancer and have not been validated were represented by features derived from GO terms and KEGG pathways using the enrichment theory. A popular feature selection method, minimum redundancy maximum relevance, was employed to analyze these features and extract important GO terms and KEGG pathways. An extensive analysis of the obtained GO terms and KEGG pathways was provided to confirm the correlations between them and pancreatic cancer. Hindawi Publishing Corporation 2016 2016-11-09 /pmc/articles/PMC5120232/ /pubmed/27957501 http://dx.doi.org/10.1155/2016/7861274 Text en Copyright © 2016 Hang Yin et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Yin, Hang Wang, ShaoPeng Zhang, Yu-Hang Cai, Yu-Dong Liu, Hailin Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer |
title | Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer |
title_full | Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer |
title_fullStr | Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer |
title_full_unstemmed | Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer |
title_short | Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer |
title_sort | analysis of important gene ontology terms and biological pathways related to pancreatic cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120232/ https://www.ncbi.nlm.nih.gov/pubmed/27957501 http://dx.doi.org/10.1155/2016/7861274 |
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