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Functional and Genomic Features of Human Genes Mutated in Neuropsychiatric Disorders

BACKGROUND: In recent years, a large number of studies around the world have led to the identification of causal genes for hereditary types of common and rare neurological and psychiatric disorders. OBJECTIVE: To explore the functional and genomic features of known human genes mutated in neuropsychi...

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Autores principales: Forero, Diego A., Prada, Carlos F., Perry, George
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Bentham Open 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120378/
https://www.ncbi.nlm.nih.gov/pubmed/27990183
http://dx.doi.org/10.2174/1874205X01610010143
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author Forero, Diego A.
Prada, Carlos F.
Perry, George
author_facet Forero, Diego A.
Prada, Carlos F.
Perry, George
author_sort Forero, Diego A.
collection PubMed
description BACKGROUND: In recent years, a large number of studies around the world have led to the identification of causal genes for hereditary types of common and rare neurological and psychiatric disorders. OBJECTIVE: To explore the functional and genomic features of known human genes mutated in neuropsychiatric disorders. METHODS: A systematic search was used to develop a comprehensive catalog of genes mutated in neuropsychiatric disorders (NPD). Functional enrichment and protein-protein interaction analyses were carried out. A false discovery rate approach was used for correction for multiple testing. RESULTS: We found several functional categories that are enriched among NPD genes, such as gene ontologies, protein domains, tissue expression, signaling pathways and regulation by brain-expressed miRNAs and transcription factors. Sixty six of those NPD genes are known to be druggable. Several topographic parameters of protein-protein interaction networks and the degree of conservation between orthologous genes were identified as significant among NPD genes. CONCLUSION: These results represent one of the first analyses of enrichment of functional categories of genes known to harbor mutations for NPD. These findings could be useful for a future creation of computational tools for prioritization of novel candidate genes for NPD.
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spelling pubmed-51203782016-12-16 Functional and Genomic Features of Human Genes Mutated in Neuropsychiatric Disorders Forero, Diego A. Prada, Carlos F. Perry, George Open Neurol J Article BACKGROUND: In recent years, a large number of studies around the world have led to the identification of causal genes for hereditary types of common and rare neurological and psychiatric disorders. OBJECTIVE: To explore the functional and genomic features of known human genes mutated in neuropsychiatric disorders. METHODS: A systematic search was used to develop a comprehensive catalog of genes mutated in neuropsychiatric disorders (NPD). Functional enrichment and protein-protein interaction analyses were carried out. A false discovery rate approach was used for correction for multiple testing. RESULTS: We found several functional categories that are enriched among NPD genes, such as gene ontologies, protein domains, tissue expression, signaling pathways and regulation by brain-expressed miRNAs and transcription factors. Sixty six of those NPD genes are known to be druggable. Several topographic parameters of protein-protein interaction networks and the degree of conservation between orthologous genes were identified as significant among NPD genes. CONCLUSION: These results represent one of the first analyses of enrichment of functional categories of genes known to harbor mutations for NPD. These findings could be useful for a future creation of computational tools for prioritization of novel candidate genes for NPD. Bentham Open 2016-11-11 /pmc/articles/PMC5120378/ /pubmed/27990183 http://dx.doi.org/10.2174/1874205X01610010143 Text en © Forero et al.; Licensee Bentham Open https://creativecommons.org/licenses/by-nc/4.0/legalcode This is an open access article licensed under the terms of the Creative Commons Attribution-Non-Commercial 4.0 International Public License (CC BY-NC 4.0) (https://creativecommons.org/licenses/by-nc/4.0/legalcode), which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited.
spellingShingle Article
Forero, Diego A.
Prada, Carlos F.
Perry, George
Functional and Genomic Features of Human Genes Mutated in Neuropsychiatric Disorders
title Functional and Genomic Features of Human Genes Mutated in Neuropsychiatric Disorders
title_full Functional and Genomic Features of Human Genes Mutated in Neuropsychiatric Disorders
title_fullStr Functional and Genomic Features of Human Genes Mutated in Neuropsychiatric Disorders
title_full_unstemmed Functional and Genomic Features of Human Genes Mutated in Neuropsychiatric Disorders
title_short Functional and Genomic Features of Human Genes Mutated in Neuropsychiatric Disorders
title_sort functional and genomic features of human genes mutated in neuropsychiatric disorders
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120378/
https://www.ncbi.nlm.nih.gov/pubmed/27990183
http://dx.doi.org/10.2174/1874205X01610010143
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