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Crystal structure of 3-(2-hy­droxy­eth­yl)-2-methyl­sulfanyl-6-nitro-3H-benzimidazol-1-ium chloride monohydrate

In the cation of the title hydrated molecular salt, C(10)H(12)N(3)O(3)S(+)·Cl(−)·H(2)O, the benzimidazolium ring system is almost planar (r.m.s. deviation = 0.006 Å) and the nitro group is inclined at an angle of 4.86 (9)° to this plane. In the crystal, C—H⋯O hydrogen bonds form centrosymmetric R (2...

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Autores principales: Abou, Akoun, Coulibali, Siomenan, Kakou-Yao, Rita, Zoueu, T. Jérémie, Tenon, A. Jules
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120724/
https://www.ncbi.nlm.nih.gov/pubmed/27920934
http://dx.doi.org/10.1107/S2056989016013657
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author Abou, Akoun
Coulibali, Siomenan
Kakou-Yao, Rita
Zoueu, T. Jérémie
Tenon, A. Jules
author_facet Abou, Akoun
Coulibali, Siomenan
Kakou-Yao, Rita
Zoueu, T. Jérémie
Tenon, A. Jules
author_sort Abou, Akoun
collection PubMed
description In the cation of the title hydrated molecular salt, C(10)H(12)N(3)O(3)S(+)·Cl(−)·H(2)O, the benzimidazolium ring system is almost planar (r.m.s. deviation = 0.006 Å) and the nitro group is inclined at an angle of 4.86 (9)° to this plane. In the crystal, C—H⋯O hydrogen bonds form centrosymmetric R (2) (2)(20) dimers and these are further aggregated through N—H⋯O and O—H⋯Cl hydrogen bonds involving the water mol­ecules and chloride anions. Aromatic π–π stacking inter­actions are also found between two parallel benzene rings or the benzene and imidazolium rings, with centroid–centroid distances of 3.5246 (9) and 3.7756 (9) Å, respectively. Analysis of the bond lengths and comparison with related compounds show that the nitro substituent is not involved in conjugation with the adjacent π-system and hence has no effect on the charge distribution of the heterocyclic ring.
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spelling pubmed-51207242016-12-05 Crystal structure of 3-(2-hy­droxy­eth­yl)-2-methyl­sulfanyl-6-nitro-3H-benzimidazol-1-ium chloride monohydrate Abou, Akoun Coulibali, Siomenan Kakou-Yao, Rita Zoueu, T. Jérémie Tenon, A. Jules Acta Crystallogr E Crystallogr Commun Research Communications In the cation of the title hydrated molecular salt, C(10)H(12)N(3)O(3)S(+)·Cl(−)·H(2)O, the benzimidazolium ring system is almost planar (r.m.s. deviation = 0.006 Å) and the nitro group is inclined at an angle of 4.86 (9)° to this plane. In the crystal, C—H⋯O hydrogen bonds form centrosymmetric R (2) (2)(20) dimers and these are further aggregated through N—H⋯O and O—H⋯Cl hydrogen bonds involving the water mol­ecules and chloride anions. Aromatic π–π stacking inter­actions are also found between two parallel benzene rings or the benzene and imidazolium rings, with centroid–centroid distances of 3.5246 (9) and 3.7756 (9) Å, respectively. Analysis of the bond lengths and comparison with related compounds show that the nitro substituent is not involved in conjugation with the adjacent π-system and hence has no effect on the charge distribution of the heterocyclic ring. International Union of Crystallography 2016-08-31 /pmc/articles/PMC5120724/ /pubmed/27920934 http://dx.doi.org/10.1107/S2056989016013657 Text en © Abou et al. 2016 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Communications
Abou, Akoun
Coulibali, Siomenan
Kakou-Yao, Rita
Zoueu, T. Jérémie
Tenon, A. Jules
Crystal structure of 3-(2-hy­droxy­eth­yl)-2-methyl­sulfanyl-6-nitro-3H-benzimidazol-1-ium chloride monohydrate
title Crystal structure of 3-(2-hy­droxy­eth­yl)-2-methyl­sulfanyl-6-nitro-3H-benzimidazol-1-ium chloride monohydrate
title_full Crystal structure of 3-(2-hy­droxy­eth­yl)-2-methyl­sulfanyl-6-nitro-3H-benzimidazol-1-ium chloride monohydrate
title_fullStr Crystal structure of 3-(2-hy­droxy­eth­yl)-2-methyl­sulfanyl-6-nitro-3H-benzimidazol-1-ium chloride monohydrate
title_full_unstemmed Crystal structure of 3-(2-hy­droxy­eth­yl)-2-methyl­sulfanyl-6-nitro-3H-benzimidazol-1-ium chloride monohydrate
title_short Crystal structure of 3-(2-hy­droxy­eth­yl)-2-methyl­sulfanyl-6-nitro-3H-benzimidazol-1-ium chloride monohydrate
title_sort crystal structure of 3-(2-hy­droxy­eth­yl)-2-methyl­sulfanyl-6-nitro-3h-benzimidazol-1-ium chloride monohydrate
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120724/
https://www.ncbi.nlm.nih.gov/pubmed/27920934
http://dx.doi.org/10.1107/S2056989016013657
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