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Ultrasensitive, rapid and inexpensive detection of DNA using paper based lateral flow assay

Sensitive, specific, rapid, inexpensive and easy-to-use nucleic acid tests for use at the point-of-need are critical for the emerging field of personalised medicine for which companion diagnostics are essential, as well as for application in low resource settings. Here we report on the development o...

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Autores principales: Jauset-Rubio, Miriam, Svobodová, Markéta, Mairal, Teresa, McNeil, Calum, Keegan, Neil, Saeed, Ayman, Abbas, Mohammad Nooredeen, El-Shahawi, Mohammad S., Bashammakh, Abdulaziz S., Alyoubi, Abdulrahman O., O´Sullivan, Ciara K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5123575/
https://www.ncbi.nlm.nih.gov/pubmed/27886248
http://dx.doi.org/10.1038/srep37732
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author Jauset-Rubio, Miriam
Svobodová, Markéta
Mairal, Teresa
McNeil, Calum
Keegan, Neil
Saeed, Ayman
Abbas, Mohammad Nooredeen
El-Shahawi, Mohammad S.
Bashammakh, Abdulaziz S.
Alyoubi, Abdulrahman O.
O´Sullivan, Ciara K.
author_facet Jauset-Rubio, Miriam
Svobodová, Markéta
Mairal, Teresa
McNeil, Calum
Keegan, Neil
Saeed, Ayman
Abbas, Mohammad Nooredeen
El-Shahawi, Mohammad S.
Bashammakh, Abdulaziz S.
Alyoubi, Abdulrahman O.
O´Sullivan, Ciara K.
author_sort Jauset-Rubio, Miriam
collection PubMed
description Sensitive, specific, rapid, inexpensive and easy-to-use nucleic acid tests for use at the point-of-need are critical for the emerging field of personalised medicine for which companion diagnostics are essential, as well as for application in low resource settings. Here we report on the development of a point-of-care nucleic acid lateral flow test for the direct detection of isothermally amplified DNA. The recombinase polymerase amplification method is modified slightly to use tailed primers, resulting in an amplicon with a duplex flanked by two single stranded DNA tails. This tailed amplicon facilitates detection via hybridisation to a surface immobilised oligonucleotide capture probe and a gold nanoparticle labelled reporter probe. A detection limit of 1 × 10(−11) M (190 amol), equivalent to 8.67 × 10(5) copies of DNA was achieved, with the entire assay, both amplification and detection, being completed in less than 15 minutes at a constant temperature of 37 °C. The use of the tailed primers obviates the need for hapten labelling and consequent use of capture and reporter antibodies, whilst also avoiding the need for any post-amplification processing for the generation of single stranded DNA, thus presenting an assay that can facilely find application at the point of need.
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spelling pubmed-51235752016-12-07 Ultrasensitive, rapid and inexpensive detection of DNA using paper based lateral flow assay Jauset-Rubio, Miriam Svobodová, Markéta Mairal, Teresa McNeil, Calum Keegan, Neil Saeed, Ayman Abbas, Mohammad Nooredeen El-Shahawi, Mohammad S. Bashammakh, Abdulaziz S. Alyoubi, Abdulrahman O. O´Sullivan, Ciara K. Sci Rep Article Sensitive, specific, rapid, inexpensive and easy-to-use nucleic acid tests for use at the point-of-need are critical for the emerging field of personalised medicine for which companion diagnostics are essential, as well as for application in low resource settings. Here we report on the development of a point-of-care nucleic acid lateral flow test for the direct detection of isothermally amplified DNA. The recombinase polymerase amplification method is modified slightly to use tailed primers, resulting in an amplicon with a duplex flanked by two single stranded DNA tails. This tailed amplicon facilitates detection via hybridisation to a surface immobilised oligonucleotide capture probe and a gold nanoparticle labelled reporter probe. A detection limit of 1 × 10(−11) M (190 amol), equivalent to 8.67 × 10(5) copies of DNA was achieved, with the entire assay, both amplification and detection, being completed in less than 15 minutes at a constant temperature of 37 °C. The use of the tailed primers obviates the need for hapten labelling and consequent use of capture and reporter antibodies, whilst also avoiding the need for any post-amplification processing for the generation of single stranded DNA, thus presenting an assay that can facilely find application at the point of need. Nature Publishing Group 2016-11-25 /pmc/articles/PMC5123575/ /pubmed/27886248 http://dx.doi.org/10.1038/srep37732 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Jauset-Rubio, Miriam
Svobodová, Markéta
Mairal, Teresa
McNeil, Calum
Keegan, Neil
Saeed, Ayman
Abbas, Mohammad Nooredeen
El-Shahawi, Mohammad S.
Bashammakh, Abdulaziz S.
Alyoubi, Abdulrahman O.
O´Sullivan, Ciara K.
Ultrasensitive, rapid and inexpensive detection of DNA using paper based lateral flow assay
title Ultrasensitive, rapid and inexpensive detection of DNA using paper based lateral flow assay
title_full Ultrasensitive, rapid and inexpensive detection of DNA using paper based lateral flow assay
title_fullStr Ultrasensitive, rapid and inexpensive detection of DNA using paper based lateral flow assay
title_full_unstemmed Ultrasensitive, rapid and inexpensive detection of DNA using paper based lateral flow assay
title_short Ultrasensitive, rapid and inexpensive detection of DNA using paper based lateral flow assay
title_sort ultrasensitive, rapid and inexpensive detection of dna using paper based lateral flow assay
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5123575/
https://www.ncbi.nlm.nih.gov/pubmed/27886248
http://dx.doi.org/10.1038/srep37732
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