Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily

This data article provides a transcriptomic resource for the free living planarian flatworm Dugesia japonica related to the research article entitled ‘Utilizing the planarian voltage-gated ion channel transcriptome to resolve a role for a Ca(2+) channel in neuromuscular function and regeneration (J....

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Autores principales: Chan, John D., Zhang, Dan, Liu, Xiaolong, Zarowiecki, Magdalena Z., Berriman, Matthew, Marchant, Jonathan S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Data Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5124351/
https://www.ncbi.nlm.nih.gov/pubmed/27909700
http://dx.doi.org/10.1016/j.dib.2016.11.022
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author Chan, John D.
Zhang, Dan
Liu, Xiaolong
Zarowiecki, Magdalena Z.
Berriman, Matthew
Marchant, Jonathan S.
author_facet Chan, John D.
Zhang, Dan
Liu, Xiaolong
Zarowiecki, Magdalena Z.
Berriman, Matthew
Marchant, Jonathan S.
author_sort Chan, John D.
collection PubMed
description This data article provides a transcriptomic resource for the free living planarian flatworm Dugesia japonica related to the research article entitled ‘Utilizing the planarian voltage-gated ion channel transcriptome to resolve a role for a Ca(2+) channel in neuromuscular function and regeneration (J.D. Chan, D. Zhang, X. Liu, M. Zarowiecki, M. Berriman, J.S. Marchant, 2016) [1]. Data provided in this submission comprise sequence information for the unfiltered de novo assembly, the filtered assembly and a curated analysis of voltage-gated like (VGL) ion channel sequences mined from this resource. Availability of this data should facilitate further adoption of this model by laboratories interested in studying the role of individual genes of interest in planarian physiology and regenerative biology.
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spelling pubmed-51243512016-12-01 Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily Chan, John D. Zhang, Dan Liu, Xiaolong Zarowiecki, Magdalena Z. Berriman, Matthew Marchant, Jonathan S. Data Brief Data Article This data article provides a transcriptomic resource for the free living planarian flatworm Dugesia japonica related to the research article entitled ‘Utilizing the planarian voltage-gated ion channel transcriptome to resolve a role for a Ca(2+) channel in neuromuscular function and regeneration (J.D. Chan, D. Zhang, X. Liu, M. Zarowiecki, M. Berriman, J.S. Marchant, 2016) [1]. Data provided in this submission comprise sequence information for the unfiltered de novo assembly, the filtered assembly and a curated analysis of voltage-gated like (VGL) ion channel sequences mined from this resource. Availability of this data should facilitate further adoption of this model by laboratories interested in studying the role of individual genes of interest in planarian physiology and regenerative biology. Elsevier 2016-11-16 /pmc/articles/PMC5124351/ /pubmed/27909700 http://dx.doi.org/10.1016/j.dib.2016.11.022 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Chan, John D.
Zhang, Dan
Liu, Xiaolong
Zarowiecki, Magdalena Z.
Berriman, Matthew
Marchant, Jonathan S.
Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily
title Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily
title_full Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily
title_fullStr Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily
title_full_unstemmed Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily
title_short Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily
title_sort dataset for a dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5124351/
https://www.ncbi.nlm.nih.gov/pubmed/27909700
http://dx.doi.org/10.1016/j.dib.2016.11.022
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