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Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries

Progranulin deficiency in humans is associated with neurodegeneration. Its mechanisms are not yet fully understood. We performed a Yeast-2-Hybrid screen using human full-length progranulin as bait to assess the interactions of progranulin. Progranulin was screened against human fetal brain and human...

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Detalles Bibliográficos
Autor principal: Tegeder, Irmgard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5126125/
https://www.ncbi.nlm.nih.gov/pubmed/27921076
http://dx.doi.org/10.1016/j.dib.2016.11.031
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author Tegeder, Irmgard
author_facet Tegeder, Irmgard
author_sort Tegeder, Irmgard
collection PubMed
description Progranulin deficiency in humans is associated with neurodegeneration. Its mechanisms are not yet fully understood. We performed a Yeast-2-Hybrid screen using human full-length progranulin as bait to assess the interactions of progranulin. Progranulin was screened against human fetal brain and human bone marrow libraries using the standard Matchmaker technology (Clontech). This article contains the full Y2H data table, including blast results and sequences, a sorted table according to selection criteria for likely positive, putatively positive, likely false and false preys, and tables showing the gene ontology terms associated with the likely and putative preys of the brain and bone marrow libraries. The interactions with autophagy proteins were confirmed and functionally analyzed in "Progranulin overexpression in sensory neurons attenuates neuropathic pain in mice: Role of autophagy" (C. Altmann, S. Hardt, C. Fischer, J. Heidler, H.Y. Lim, A. Haussler, B. Albuquerque, B. Zimmer, C. Moser, C. Behrends, F. Koentgen, I. Wittig, M.H. Schmidt, A.M. Clement, T. Deller, I. Tegeder, 2016) [1].
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spelling pubmed-51261252016-12-05 Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries Tegeder, Irmgard Data Brief Data Article Progranulin deficiency in humans is associated with neurodegeneration. Its mechanisms are not yet fully understood. We performed a Yeast-2-Hybrid screen using human full-length progranulin as bait to assess the interactions of progranulin. Progranulin was screened against human fetal brain and human bone marrow libraries using the standard Matchmaker technology (Clontech). This article contains the full Y2H data table, including blast results and sequences, a sorted table according to selection criteria for likely positive, putatively positive, likely false and false preys, and tables showing the gene ontology terms associated with the likely and putative preys of the brain and bone marrow libraries. The interactions with autophagy proteins were confirmed and functionally analyzed in "Progranulin overexpression in sensory neurons attenuates neuropathic pain in mice: Role of autophagy" (C. Altmann, S. Hardt, C. Fischer, J. Heidler, H.Y. Lim, A. Haussler, B. Albuquerque, B. Zimmer, C. Moser, C. Behrends, F. Koentgen, I. Wittig, M.H. Schmidt, A.M. Clement, T. Deller, I. Tegeder, 2016) [1]. Elsevier 2016-11-19 /pmc/articles/PMC5126125/ /pubmed/27921076 http://dx.doi.org/10.1016/j.dib.2016.11.031 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Tegeder, Irmgard
Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries
title Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries
title_full Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries
title_fullStr Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries
title_full_unstemmed Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries
title_short Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries
title_sort yeast-2-hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5126125/
https://www.ncbi.nlm.nih.gov/pubmed/27921076
http://dx.doi.org/10.1016/j.dib.2016.11.031
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