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Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries
Progranulin deficiency in humans is associated with neurodegeneration. Its mechanisms are not yet fully understood. We performed a Yeast-2-Hybrid screen using human full-length progranulin as bait to assess the interactions of progranulin. Progranulin was screened against human fetal brain and human...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5126125/ https://www.ncbi.nlm.nih.gov/pubmed/27921076 http://dx.doi.org/10.1016/j.dib.2016.11.031 |
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author | Tegeder, Irmgard |
author_facet | Tegeder, Irmgard |
author_sort | Tegeder, Irmgard |
collection | PubMed |
description | Progranulin deficiency in humans is associated with neurodegeneration. Its mechanisms are not yet fully understood. We performed a Yeast-2-Hybrid screen using human full-length progranulin as bait to assess the interactions of progranulin. Progranulin was screened against human fetal brain and human bone marrow libraries using the standard Matchmaker technology (Clontech). This article contains the full Y2H data table, including blast results and sequences, a sorted table according to selection criteria for likely positive, putatively positive, likely false and false preys, and tables showing the gene ontology terms associated with the likely and putative preys of the brain and bone marrow libraries. The interactions with autophagy proteins were confirmed and functionally analyzed in "Progranulin overexpression in sensory neurons attenuates neuropathic pain in mice: Role of autophagy" (C. Altmann, S. Hardt, C. Fischer, J. Heidler, H.Y. Lim, A. Haussler, B. Albuquerque, B. Zimmer, C. Moser, C. Behrends, F. Koentgen, I. Wittig, M.H. Schmidt, A.M. Clement, T. Deller, I. Tegeder, 2016) [1]. |
format | Online Article Text |
id | pubmed-5126125 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-51261252016-12-05 Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries Tegeder, Irmgard Data Brief Data Article Progranulin deficiency in humans is associated with neurodegeneration. Its mechanisms are not yet fully understood. We performed a Yeast-2-Hybrid screen using human full-length progranulin as bait to assess the interactions of progranulin. Progranulin was screened against human fetal brain and human bone marrow libraries using the standard Matchmaker technology (Clontech). This article contains the full Y2H data table, including blast results and sequences, a sorted table according to selection criteria for likely positive, putatively positive, likely false and false preys, and tables showing the gene ontology terms associated with the likely and putative preys of the brain and bone marrow libraries. The interactions with autophagy proteins were confirmed and functionally analyzed in "Progranulin overexpression in sensory neurons attenuates neuropathic pain in mice: Role of autophagy" (C. Altmann, S. Hardt, C. Fischer, J. Heidler, H.Y. Lim, A. Haussler, B. Albuquerque, B. Zimmer, C. Moser, C. Behrends, F. Koentgen, I. Wittig, M.H. Schmidt, A.M. Clement, T. Deller, I. Tegeder, 2016) [1]. Elsevier 2016-11-19 /pmc/articles/PMC5126125/ /pubmed/27921076 http://dx.doi.org/10.1016/j.dib.2016.11.031 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Tegeder, Irmgard Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries |
title | Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries |
title_full | Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries |
title_fullStr | Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries |
title_full_unstemmed | Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries |
title_short | Yeast-2-Hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries |
title_sort | yeast-2-hybrid data file showing progranulin interactions in human fetal brain and bone marrow libraries |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5126125/ https://www.ncbi.nlm.nih.gov/pubmed/27921076 http://dx.doi.org/10.1016/j.dib.2016.11.031 |
work_keys_str_mv | AT tegederirmgard yeast2hybriddatafileshowingprogranulininteractionsinhumanfetalbrainandbonemarrowlibraries |