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Kaumoebavirus, a New Virus That Clusters with Faustoviruses and Asfarviridae

In this study, we report the isolation of a new giant virus found in sewage water from the southern area of Jeddah (Saudi Arabia), with morphological and genomic resemblance to Faustoviruses. This new giant virus, named Kaumoebavirus, was obtained from co-culture with Vermamoeba vermiformis, an amoe...

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Detalles Bibliográficos
Autores principales: Bajrai, Leena H., Benamar, Samia, Azhar, Esam I., Robert, Catherine, Levasseur, Anthony, Raoult, Didier, La Scola, Bernard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5127008/
https://www.ncbi.nlm.nih.gov/pubmed/27801826
http://dx.doi.org/10.3390/v8110278
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author Bajrai, Leena H.
Benamar, Samia
Azhar, Esam I.
Robert, Catherine
Levasseur, Anthony
Raoult, Didier
La Scola, Bernard
author_facet Bajrai, Leena H.
Benamar, Samia
Azhar, Esam I.
Robert, Catherine
Levasseur, Anthony
Raoult, Didier
La Scola, Bernard
author_sort Bajrai, Leena H.
collection PubMed
description In this study, we report the isolation of a new giant virus found in sewage water from the southern area of Jeddah (Saudi Arabia), with morphological and genomic resemblance to Faustoviruses. This new giant virus, named Kaumoebavirus, was obtained from co-culture with Vermamoeba vermiformis, an amoeboid protozoa considered to be of special interest to human health and the environment. This new virus has ~250 nm icosahedral capsids and a 350,731 bp DNA genome length. The genome of Kaumoebavirus has a coding density of 86%, corresponding to 465 genes. Most of these genes (59%) are closely related to genes from members of the proposed order Megavirales, and the best matches to its proteins with other members of the Megavirales are Faustoviruses (43%) and Asfarviruses (23%). Unsurprisingly, phylogenetic reconstruction places Kaumoebavirus as a distant relative of Faustoviruses and Asfarviruses.
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spelling pubmed-51270082016-12-02 Kaumoebavirus, a New Virus That Clusters with Faustoviruses and Asfarviridae Bajrai, Leena H. Benamar, Samia Azhar, Esam I. Robert, Catherine Levasseur, Anthony Raoult, Didier La Scola, Bernard Viruses Article In this study, we report the isolation of a new giant virus found in sewage water from the southern area of Jeddah (Saudi Arabia), with morphological and genomic resemblance to Faustoviruses. This new giant virus, named Kaumoebavirus, was obtained from co-culture with Vermamoeba vermiformis, an amoeboid protozoa considered to be of special interest to human health and the environment. This new virus has ~250 nm icosahedral capsids and a 350,731 bp DNA genome length. The genome of Kaumoebavirus has a coding density of 86%, corresponding to 465 genes. Most of these genes (59%) are closely related to genes from members of the proposed order Megavirales, and the best matches to its proteins with other members of the Megavirales are Faustoviruses (43%) and Asfarviruses (23%). Unsurprisingly, phylogenetic reconstruction places Kaumoebavirus as a distant relative of Faustoviruses and Asfarviruses. MDPI 2016-10-28 /pmc/articles/PMC5127008/ /pubmed/27801826 http://dx.doi.org/10.3390/v8110278 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bajrai, Leena H.
Benamar, Samia
Azhar, Esam I.
Robert, Catherine
Levasseur, Anthony
Raoult, Didier
La Scola, Bernard
Kaumoebavirus, a New Virus That Clusters with Faustoviruses and Asfarviridae
title Kaumoebavirus, a New Virus That Clusters with Faustoviruses and Asfarviridae
title_full Kaumoebavirus, a New Virus That Clusters with Faustoviruses and Asfarviridae
title_fullStr Kaumoebavirus, a New Virus That Clusters with Faustoviruses and Asfarviridae
title_full_unstemmed Kaumoebavirus, a New Virus That Clusters with Faustoviruses and Asfarviridae
title_short Kaumoebavirus, a New Virus That Clusters with Faustoviruses and Asfarviridae
title_sort kaumoebavirus, a new virus that clusters with faustoviruses and asfarviridae
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5127008/
https://www.ncbi.nlm.nih.gov/pubmed/27801826
http://dx.doi.org/10.3390/v8110278
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