Cargando…

Digital gene expression profiling analysis of duodenum transcriptomes in SD rats administered ferrous sulfate or ferrous glycine chelate by gavage

The absorption of different iron sources is a trending research topic. Many studies have revealed that organic iron exhibits better bioavailability than inorganic iron, but the concrete underlying mechanism is still unclear. In the present study, we examined the differences in bioavailability of fer...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhuo, Zhao, Fang, Shenglin, Hu, Qiaoling, Huang, Danping, Feng, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5128800/
https://www.ncbi.nlm.nih.gov/pubmed/27901057
http://dx.doi.org/10.1038/srep37923
_version_ 1782470476473303040
author Zhuo, Zhao
Fang, Shenglin
Hu, Qiaoling
Huang, Danping
Feng, Jie
author_facet Zhuo, Zhao
Fang, Shenglin
Hu, Qiaoling
Huang, Danping
Feng, Jie
author_sort Zhuo, Zhao
collection PubMed
description The absorption of different iron sources is a trending research topic. Many studies have revealed that organic iron exhibits better bioavailability than inorganic iron, but the concrete underlying mechanism is still unclear. In the present study, we examined the differences in bioavailability of ferrous sulfate and ferrous glycinate in the intestines of SD rats using Illumina sequencing technology. Digital gene expression analysis resulted in the generation of almost 128 million clean reads, with expression data for 17,089 unigenes. A total of 123 differentially expressed genes with a |log2(fold change)| >1 and q-value < 0.05 were identified between the FeSO(4) and Fe-Gly groups. Gene Ontology functional analysis revealed that these genes were involved in oxidoreductase activity, iron ion binding, and heme binding. Kyoto Encyclopedia of Genes and Genomes pathway analysis also showed relevant important pathways. In addition, the expression patterns of 9 randomly selected genes were further validated by qRT-PCR, which confirmed the digital gene expression results. Our study showed that the two iron sources might share the same absorption mechanism, and that differences in bioavailability between FeSO(4) and Fe-Gly were not only in the absorption process but also during the transport and utilization process.
format Online
Article
Text
id pubmed-5128800
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-51288002016-12-09 Digital gene expression profiling analysis of duodenum transcriptomes in SD rats administered ferrous sulfate or ferrous glycine chelate by gavage Zhuo, Zhao Fang, Shenglin Hu, Qiaoling Huang, Danping Feng, Jie Sci Rep Article The absorption of different iron sources is a trending research topic. Many studies have revealed that organic iron exhibits better bioavailability than inorganic iron, but the concrete underlying mechanism is still unclear. In the present study, we examined the differences in bioavailability of ferrous sulfate and ferrous glycinate in the intestines of SD rats using Illumina sequencing technology. Digital gene expression analysis resulted in the generation of almost 128 million clean reads, with expression data for 17,089 unigenes. A total of 123 differentially expressed genes with a |log2(fold change)| >1 and q-value < 0.05 were identified between the FeSO(4) and Fe-Gly groups. Gene Ontology functional analysis revealed that these genes were involved in oxidoreductase activity, iron ion binding, and heme binding. Kyoto Encyclopedia of Genes and Genomes pathway analysis also showed relevant important pathways. In addition, the expression patterns of 9 randomly selected genes were further validated by qRT-PCR, which confirmed the digital gene expression results. Our study showed that the two iron sources might share the same absorption mechanism, and that differences in bioavailability between FeSO(4) and Fe-Gly were not only in the absorption process but also during the transport and utilization process. Nature Publishing Group 2016-11-30 /pmc/articles/PMC5128800/ /pubmed/27901057 http://dx.doi.org/10.1038/srep37923 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Zhuo, Zhao
Fang, Shenglin
Hu, Qiaoling
Huang, Danping
Feng, Jie
Digital gene expression profiling analysis of duodenum transcriptomes in SD rats administered ferrous sulfate or ferrous glycine chelate by gavage
title Digital gene expression profiling analysis of duodenum transcriptomes in SD rats administered ferrous sulfate or ferrous glycine chelate by gavage
title_full Digital gene expression profiling analysis of duodenum transcriptomes in SD rats administered ferrous sulfate or ferrous glycine chelate by gavage
title_fullStr Digital gene expression profiling analysis of duodenum transcriptomes in SD rats administered ferrous sulfate or ferrous glycine chelate by gavage
title_full_unstemmed Digital gene expression profiling analysis of duodenum transcriptomes in SD rats administered ferrous sulfate or ferrous glycine chelate by gavage
title_short Digital gene expression profiling analysis of duodenum transcriptomes in SD rats administered ferrous sulfate or ferrous glycine chelate by gavage
title_sort digital gene expression profiling analysis of duodenum transcriptomes in sd rats administered ferrous sulfate or ferrous glycine chelate by gavage
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5128800/
https://www.ncbi.nlm.nih.gov/pubmed/27901057
http://dx.doi.org/10.1038/srep37923
work_keys_str_mv AT zhuozhao digitalgeneexpressionprofilinganalysisofduodenumtranscriptomesinsdratsadministeredferroussulfateorferrousglycinechelatebygavage
AT fangshenglin digitalgeneexpressionprofilinganalysisofduodenumtranscriptomesinsdratsadministeredferroussulfateorferrousglycinechelatebygavage
AT huqiaoling digitalgeneexpressionprofilinganalysisofduodenumtranscriptomesinsdratsadministeredferroussulfateorferrousglycinechelatebygavage
AT huangdanping digitalgeneexpressionprofilinganalysisofduodenumtranscriptomesinsdratsadministeredferroussulfateorferrousglycinechelatebygavage
AT fengjie digitalgeneexpressionprofilinganalysisofduodenumtranscriptomesinsdratsadministeredferroussulfateorferrousglycinechelatebygavage