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Sparsity-based multi-height phase recovery in holographic microscopy
High-resolution imaging of densely connected samples such as pathology slides using digital in-line holographic microscopy requires the acquisition of several holograms, e.g., at >6–8 different sample-to-sensor distances, to achieve robust phase recovery and coherent imaging of specimen. Reducing...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5129015/ https://www.ncbi.nlm.nih.gov/pubmed/27901048 http://dx.doi.org/10.1038/srep37862 |
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author | Rivenson, Yair Wu, Yichen Wang, Hongda Zhang, Yibo Feizi, Alborz Ozcan, Aydogan |
author_facet | Rivenson, Yair Wu, Yichen Wang, Hongda Zhang, Yibo Feizi, Alborz Ozcan, Aydogan |
author_sort | Rivenson, Yair |
collection | PubMed |
description | High-resolution imaging of densely connected samples such as pathology slides using digital in-line holographic microscopy requires the acquisition of several holograms, e.g., at >6–8 different sample-to-sensor distances, to achieve robust phase recovery and coherent imaging of specimen. Reducing the number of these holographic measurements would normally result in reconstruction artifacts and loss of image quality, which would be detrimental especially for biomedical and diagnostics-related applications. Inspired by the fact that most natural images are sparse in some domain, here we introduce a sparsity-based phase reconstruction technique implemented in wavelet domain to achieve at least 2-fold reduction in the number of holographic measurements for coherent imaging of densely connected samples with minimal impact on the reconstructed image quality, quantified using a structural similarity index. We demonstrated the success of this approach by imaging Papanicolaou smears and breast cancer tissue slides over a large field-of-view of ~20 mm(2) using 2 in-line holograms that are acquired at different sample-to-sensor distances and processed using sparsity-based multi-height phase recovery. This new phase recovery approach that makes use of sparsity can also be extended to other coherent imaging schemes, involving e.g., multiple illumination angles or wavelengths to increase the throughput and speed of coherent imaging. |
format | Online Article Text |
id | pubmed-5129015 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-51290152016-12-15 Sparsity-based multi-height phase recovery in holographic microscopy Rivenson, Yair Wu, Yichen Wang, Hongda Zhang, Yibo Feizi, Alborz Ozcan, Aydogan Sci Rep Article High-resolution imaging of densely connected samples such as pathology slides using digital in-line holographic microscopy requires the acquisition of several holograms, e.g., at >6–8 different sample-to-sensor distances, to achieve robust phase recovery and coherent imaging of specimen. Reducing the number of these holographic measurements would normally result in reconstruction artifacts and loss of image quality, which would be detrimental especially for biomedical and diagnostics-related applications. Inspired by the fact that most natural images are sparse in some domain, here we introduce a sparsity-based phase reconstruction technique implemented in wavelet domain to achieve at least 2-fold reduction in the number of holographic measurements for coherent imaging of densely connected samples with minimal impact on the reconstructed image quality, quantified using a structural similarity index. We demonstrated the success of this approach by imaging Papanicolaou smears and breast cancer tissue slides over a large field-of-view of ~20 mm(2) using 2 in-line holograms that are acquired at different sample-to-sensor distances and processed using sparsity-based multi-height phase recovery. This new phase recovery approach that makes use of sparsity can also be extended to other coherent imaging schemes, involving e.g., multiple illumination angles or wavelengths to increase the throughput and speed of coherent imaging. Nature Publishing Group 2016-11-30 /pmc/articles/PMC5129015/ /pubmed/27901048 http://dx.doi.org/10.1038/srep37862 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Rivenson, Yair Wu, Yichen Wang, Hongda Zhang, Yibo Feizi, Alborz Ozcan, Aydogan Sparsity-based multi-height phase recovery in holographic microscopy |
title | Sparsity-based multi-height phase recovery in holographic microscopy |
title_full | Sparsity-based multi-height phase recovery in holographic microscopy |
title_fullStr | Sparsity-based multi-height phase recovery in holographic microscopy |
title_full_unstemmed | Sparsity-based multi-height phase recovery in holographic microscopy |
title_short | Sparsity-based multi-height phase recovery in holographic microscopy |
title_sort | sparsity-based multi-height phase recovery in holographic microscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5129015/ https://www.ncbi.nlm.nih.gov/pubmed/27901048 http://dx.doi.org/10.1038/srep37862 |
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