Molecular characterization of new described kobuvirus in dogs with diarrhea in China

Canine kobuvirus (CaKVs) was a newly described virus detected in dogs in the US and Italy. To learn more about CaKVs, 5 of 106 fecal samples from diarrhea dogs were positive with CaKVs in China, and the full genome of CaKVs strain CH-1 isolated from dog with diarrhea was sequenced. The genome consis...

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Autores principales: Kong, Ning, Zuo, Yewen, Wang, Zhongze, Yu, Hai, Zhou, En-min, Shan, Tongling, Tong, Guangzhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2016
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5130936/
https://www.ncbi.nlm.nih.gov/pubmed/27995024
http://dx.doi.org/10.1186/s40064-016-3738-4
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author Kong, Ning
Zuo, Yewen
Wang, Zhongze
Yu, Hai
Zhou, En-min
Shan, Tongling
Tong, Guangzhi
author_facet Kong, Ning
Zuo, Yewen
Wang, Zhongze
Yu, Hai
Zhou, En-min
Shan, Tongling
Tong, Guangzhi
author_sort Kong, Ning
collection PubMed
description Canine kobuvirus (CaKVs) was a newly described virus detected in dogs in the US and Italy. To learn more about CaKVs, 5 of 106 fecal samples from diarrhea dogs were positive with CaKVs in China, and the full genome of CaKVs strain CH-1 isolated from dog with diarrhea was sequenced. The genome consists of 8186 nucleotides, excluding the 3′ poly (A) tail, and an open reading frame that maps between nucleotide positions 601 and 7943 which encodes a 2446 amino acid polyprotein. Based on the complete amino acid sequence of polyprotein, phylogenetic analysis showed that CH-1 was grouped along with other canine kobuvirus strains detected in the USA (US-PC0082, AN211D).
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spelling pubmed-51309362016-12-19 Molecular characterization of new described kobuvirus in dogs with diarrhea in China Kong, Ning Zuo, Yewen Wang, Zhongze Yu, Hai Zhou, En-min Shan, Tongling Tong, Guangzhi Springerplus Research Canine kobuvirus (CaKVs) was a newly described virus detected in dogs in the US and Italy. To learn more about CaKVs, 5 of 106 fecal samples from diarrhea dogs were positive with CaKVs in China, and the full genome of CaKVs strain CH-1 isolated from dog with diarrhea was sequenced. The genome consists of 8186 nucleotides, excluding the 3′ poly (A) tail, and an open reading frame that maps between nucleotide positions 601 and 7943 which encodes a 2446 amino acid polyprotein. Based on the complete amino acid sequence of polyprotein, phylogenetic analysis showed that CH-1 was grouped along with other canine kobuvirus strains detected in the USA (US-PC0082, AN211D). Springer International Publishing 2016-11-30 /pmc/articles/PMC5130936/ /pubmed/27995024 http://dx.doi.org/10.1186/s40064-016-3738-4 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Research
Kong, Ning
Zuo, Yewen
Wang, Zhongze
Yu, Hai
Zhou, En-min
Shan, Tongling
Tong, Guangzhi
Molecular characterization of new described kobuvirus in dogs with diarrhea in China
title Molecular characterization of new described kobuvirus in dogs with diarrhea in China
title_full Molecular characterization of new described kobuvirus in dogs with diarrhea in China
title_fullStr Molecular characterization of new described kobuvirus in dogs with diarrhea in China
title_full_unstemmed Molecular characterization of new described kobuvirus in dogs with diarrhea in China
title_short Molecular characterization of new described kobuvirus in dogs with diarrhea in China
title_sort molecular characterization of new described kobuvirus in dogs with diarrhea in china
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5130936/
https://www.ncbi.nlm.nih.gov/pubmed/27995024
http://dx.doi.org/10.1186/s40064-016-3738-4
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