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Synthetic quantitative MRI through relaxometry modelling

Quantitative MRI (qMRI) provides standardized measures of specific physical parameters that are sensitive to the underlying tissue microstructure and are a first step towards achieving maps of biologically relevant metrics through in vivo histology using MRI. Recently proposed models have described...

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Autores principales: Callaghan, Martina F., Mohammadi, Siawoosh, Weiskopf, Nikolaus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5132086/
https://www.ncbi.nlm.nih.gov/pubmed/27753154
http://dx.doi.org/10.1002/nbm.3658
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author Callaghan, Martina F.
Mohammadi, Siawoosh
Weiskopf, Nikolaus
author_facet Callaghan, Martina F.
Mohammadi, Siawoosh
Weiskopf, Nikolaus
author_sort Callaghan, Martina F.
collection PubMed
description Quantitative MRI (qMRI) provides standardized measures of specific physical parameters that are sensitive to the underlying tissue microstructure and are a first step towards achieving maps of biologically relevant metrics through in vivo histology using MRI. Recently proposed models have described the interdependence of qMRI parameters. Combining such models with the concept of image synthesis points towards a novel approach to synthetic qMRI, in which maps of fundamentally different physical properties are constructed through the use of biophysical models. In this study, the utility of synthetic qMRI is investigated within the context of a recently proposed linear relaxometry model. Two neuroimaging applications are considered. In the first, artefact‐free quantitative maps are synthesized from motion‐corrupted data by exploiting the over‐determined nature of the relaxometry model and the fact that the artefact is inconsistent across the data. In the second application, a map of magnetization transfer (MT) saturation is synthesized without the need to acquire an MT‐weighted volume, which directly leads to a reduction in the specific absorption rate of the acquisition. This feature would be particularly important for ultra‐high field applications. The synthetic MT map is shown to provide improved segmentation of deep grey matter structures, relative to segmentation using T (1)‐weighted images or R (1) maps. The proposed approach of synthetic qMRI shows promise for maximizing the extraction of high quality information related to tissue microstructure from qMRI protocols and furthering our understanding of the interrelation of these qMRI parameters.
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spelling pubmed-51320862016-12-02 Synthetic quantitative MRI through relaxometry modelling Callaghan, Martina F. Mohammadi, Siawoosh Weiskopf, Nikolaus NMR Biomed Research Articles Quantitative MRI (qMRI) provides standardized measures of specific physical parameters that are sensitive to the underlying tissue microstructure and are a first step towards achieving maps of biologically relevant metrics through in vivo histology using MRI. Recently proposed models have described the interdependence of qMRI parameters. Combining such models with the concept of image synthesis points towards a novel approach to synthetic qMRI, in which maps of fundamentally different physical properties are constructed through the use of biophysical models. In this study, the utility of synthetic qMRI is investigated within the context of a recently proposed linear relaxometry model. Two neuroimaging applications are considered. In the first, artefact‐free quantitative maps are synthesized from motion‐corrupted data by exploiting the over‐determined nature of the relaxometry model and the fact that the artefact is inconsistent across the data. In the second application, a map of magnetization transfer (MT) saturation is synthesized without the need to acquire an MT‐weighted volume, which directly leads to a reduction in the specific absorption rate of the acquisition. This feature would be particularly important for ultra‐high field applications. The synthetic MT map is shown to provide improved segmentation of deep grey matter structures, relative to segmentation using T (1)‐weighted images or R (1) maps. The proposed approach of synthetic qMRI shows promise for maximizing the extraction of high quality information related to tissue microstructure from qMRI protocols and furthering our understanding of the interrelation of these qMRI parameters. John Wiley and Sons Inc. 2016-10-18 2016-12 /pmc/articles/PMC5132086/ /pubmed/27753154 http://dx.doi.org/10.1002/nbm.3658 Text en © 2016 The Authors. NMR in Biomedicine published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Callaghan, Martina F.
Mohammadi, Siawoosh
Weiskopf, Nikolaus
Synthetic quantitative MRI through relaxometry modelling
title Synthetic quantitative MRI through relaxometry modelling
title_full Synthetic quantitative MRI through relaxometry modelling
title_fullStr Synthetic quantitative MRI through relaxometry modelling
title_full_unstemmed Synthetic quantitative MRI through relaxometry modelling
title_short Synthetic quantitative MRI through relaxometry modelling
title_sort synthetic quantitative mri through relaxometry modelling
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5132086/
https://www.ncbi.nlm.nih.gov/pubmed/27753154
http://dx.doi.org/10.1002/nbm.3658
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