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Investigating the Utility of Oblique Tree-Based Ensembles for the Classification of Hyperspectral Data

Ensemble classifiers are being widely used for the classification of spectroscopic data. In this regard, the random forest (RF) ensemble has been successfully applied in an array of applications, and has proven to be robust in handling high dimensional data. More recently, several variants of the tr...

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Autores principales: Poona, Nitesh, van Niekerk, Adriaan, Ismail, Riyad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5134577/
https://www.ncbi.nlm.nih.gov/pubmed/27854290
http://dx.doi.org/10.3390/s16111918
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author Poona, Nitesh
van Niekerk, Adriaan
Ismail, Riyad
author_facet Poona, Nitesh
van Niekerk, Adriaan
Ismail, Riyad
author_sort Poona, Nitesh
collection PubMed
description Ensemble classifiers are being widely used for the classification of spectroscopic data. In this regard, the random forest (RF) ensemble has been successfully applied in an array of applications, and has proven to be robust in handling high dimensional data. More recently, several variants of the traditional RF algorithm including rotation forest (rotF) and oblique random forest (oRF) have been applied to classifying high dimensional data. In this study we compare the traditional RF, rotF, and oRF (using three different splitting rules, i.e., ridge regression, partial least squares, and support vector machine) for the classification of healthy and infected Pinus radiata seedlings using high dimensional spectroscopic data. We further test the robustness of these five ensemble classifiers to reduced spectral resolution by spectral resampling (binning) of the original spectral bands. The results showed that the three oblique random forest ensembles outperformed both the traditional RF and rotF ensembles. Additionally, the rotF ensemble proved to be the least robust of the five ensembles tested. Spectral resampling of the original bands provided mixed results. Nevertheless, the results demonstrate that using spectral resampled bands is a promising approach to classifying asymptomatic stress in Pinus radiata seedlings.
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spelling pubmed-51345772017-01-03 Investigating the Utility of Oblique Tree-Based Ensembles for the Classification of Hyperspectral Data Poona, Nitesh van Niekerk, Adriaan Ismail, Riyad Sensors (Basel) Article Ensemble classifiers are being widely used for the classification of spectroscopic data. In this regard, the random forest (RF) ensemble has been successfully applied in an array of applications, and has proven to be robust in handling high dimensional data. More recently, several variants of the traditional RF algorithm including rotation forest (rotF) and oblique random forest (oRF) have been applied to classifying high dimensional data. In this study we compare the traditional RF, rotF, and oRF (using three different splitting rules, i.e., ridge regression, partial least squares, and support vector machine) for the classification of healthy and infected Pinus radiata seedlings using high dimensional spectroscopic data. We further test the robustness of these five ensemble classifiers to reduced spectral resolution by spectral resampling (binning) of the original spectral bands. The results showed that the three oblique random forest ensembles outperformed both the traditional RF and rotF ensembles. Additionally, the rotF ensemble proved to be the least robust of the five ensembles tested. Spectral resampling of the original bands provided mixed results. Nevertheless, the results demonstrate that using spectral resampled bands is a promising approach to classifying asymptomatic stress in Pinus radiata seedlings. MDPI 2016-11-15 /pmc/articles/PMC5134577/ /pubmed/27854290 http://dx.doi.org/10.3390/s16111918 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Poona, Nitesh
van Niekerk, Adriaan
Ismail, Riyad
Investigating the Utility of Oblique Tree-Based Ensembles for the Classification of Hyperspectral Data
title Investigating the Utility of Oblique Tree-Based Ensembles for the Classification of Hyperspectral Data
title_full Investigating the Utility of Oblique Tree-Based Ensembles for the Classification of Hyperspectral Data
title_fullStr Investigating the Utility of Oblique Tree-Based Ensembles for the Classification of Hyperspectral Data
title_full_unstemmed Investigating the Utility of Oblique Tree-Based Ensembles for the Classification of Hyperspectral Data
title_short Investigating the Utility of Oblique Tree-Based Ensembles for the Classification of Hyperspectral Data
title_sort investigating the utility of oblique tree-based ensembles for the classification of hyperspectral data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5134577/
https://www.ncbi.nlm.nih.gov/pubmed/27854290
http://dx.doi.org/10.3390/s16111918
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