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Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients
BACKGROUND: In general, autosomal dominant inherited hearing loss does not have a founder mutation, with the causative mutation different in each family. For this reason, there has been a strong need for efficient diagnosis methods for autosomal dominant sensorineural hearing loss (ADSNHL) patients....
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5135052/ https://www.ncbi.nlm.nih.gov/pubmed/27911912 http://dx.doi.org/10.1371/journal.pone.0166781 |
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author | Iwasa, Yoh-ichiro Nishio, Shin-ya Usami, Shin-ichi |
author_facet | Iwasa, Yoh-ichiro Nishio, Shin-ya Usami, Shin-ichi |
author_sort | Iwasa, Yoh-ichiro |
collection | PubMed |
description | BACKGROUND: In general, autosomal dominant inherited hearing loss does not have a founder mutation, with the causative mutation different in each family. For this reason, there has been a strong need for efficient diagnosis methods for autosomal dominant sensorineural hearing loss (ADSNHL) patients. This study sought to verify the effectiveness of our analysis algorithm for the screening of ADSNHL patients as well as the usefulness of the massively parallel DNA sequencing (MPS). SUBJECTS AND METHODS: Seventy-five Japanese ADSNHL patients from 53 ENT departments nationwide participated in this study. We conducted genetic analysis of 75 ADSNHL patients using the Invader assay, TaqMan genotyping assay and MPS-based genetic screening. RESULTS: A total of 46 (61.3%) ADSNHL patients were found to have at least one candidate gene variant. CONCLUSION: We were able to achieve a high mutation detection rate through the combination of the Invader assay, TaqMan genotyping assay and MPS. MPS could be used to successfully identify mutations in rare deafness genes. |
format | Online Article Text |
id | pubmed-5135052 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-51350522016-12-21 Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients Iwasa, Yoh-ichiro Nishio, Shin-ya Usami, Shin-ichi PLoS One Research Article BACKGROUND: In general, autosomal dominant inherited hearing loss does not have a founder mutation, with the causative mutation different in each family. For this reason, there has been a strong need for efficient diagnosis methods for autosomal dominant sensorineural hearing loss (ADSNHL) patients. This study sought to verify the effectiveness of our analysis algorithm for the screening of ADSNHL patients as well as the usefulness of the massively parallel DNA sequencing (MPS). SUBJECTS AND METHODS: Seventy-five Japanese ADSNHL patients from 53 ENT departments nationwide participated in this study. We conducted genetic analysis of 75 ADSNHL patients using the Invader assay, TaqMan genotyping assay and MPS-based genetic screening. RESULTS: A total of 46 (61.3%) ADSNHL patients were found to have at least one candidate gene variant. CONCLUSION: We were able to achieve a high mutation detection rate through the combination of the Invader assay, TaqMan genotyping assay and MPS. MPS could be used to successfully identify mutations in rare deafness genes. Public Library of Science 2016-12-02 /pmc/articles/PMC5135052/ /pubmed/27911912 http://dx.doi.org/10.1371/journal.pone.0166781 Text en © 2016 Iwasa et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Iwasa, Yoh-ichiro Nishio, Shin-ya Usami, Shin-ichi Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients |
title | Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients |
title_full | Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients |
title_fullStr | Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients |
title_full_unstemmed | Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients |
title_short | Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients |
title_sort | comprehensive genetic analysis of japanese autosomal dominant sensorineural hearing loss patients |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5135052/ https://www.ncbi.nlm.nih.gov/pubmed/27911912 http://dx.doi.org/10.1371/journal.pone.0166781 |
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