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Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients

BACKGROUND: In general, autosomal dominant inherited hearing loss does not have a founder mutation, with the causative mutation different in each family. For this reason, there has been a strong need for efficient diagnosis methods for autosomal dominant sensorineural hearing loss (ADSNHL) patients....

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Detalles Bibliográficos
Autores principales: Iwasa, Yoh-ichiro, Nishio, Shin-ya, Usami, Shin-ichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5135052/
https://www.ncbi.nlm.nih.gov/pubmed/27911912
http://dx.doi.org/10.1371/journal.pone.0166781
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author Iwasa, Yoh-ichiro
Nishio, Shin-ya
Usami, Shin-ichi
author_facet Iwasa, Yoh-ichiro
Nishio, Shin-ya
Usami, Shin-ichi
author_sort Iwasa, Yoh-ichiro
collection PubMed
description BACKGROUND: In general, autosomal dominant inherited hearing loss does not have a founder mutation, with the causative mutation different in each family. For this reason, there has been a strong need for efficient diagnosis methods for autosomal dominant sensorineural hearing loss (ADSNHL) patients. This study sought to verify the effectiveness of our analysis algorithm for the screening of ADSNHL patients as well as the usefulness of the massively parallel DNA sequencing (MPS). SUBJECTS AND METHODS: Seventy-five Japanese ADSNHL patients from 53 ENT departments nationwide participated in this study. We conducted genetic analysis of 75 ADSNHL patients using the Invader assay, TaqMan genotyping assay and MPS-based genetic screening. RESULTS: A total of 46 (61.3%) ADSNHL patients were found to have at least one candidate gene variant. CONCLUSION: We were able to achieve a high mutation detection rate through the combination of the Invader assay, TaqMan genotyping assay and MPS. MPS could be used to successfully identify mutations in rare deafness genes.
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spelling pubmed-51350522016-12-21 Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients Iwasa, Yoh-ichiro Nishio, Shin-ya Usami, Shin-ichi PLoS One Research Article BACKGROUND: In general, autosomal dominant inherited hearing loss does not have a founder mutation, with the causative mutation different in each family. For this reason, there has been a strong need for efficient diagnosis methods for autosomal dominant sensorineural hearing loss (ADSNHL) patients. This study sought to verify the effectiveness of our analysis algorithm for the screening of ADSNHL patients as well as the usefulness of the massively parallel DNA sequencing (MPS). SUBJECTS AND METHODS: Seventy-five Japanese ADSNHL patients from 53 ENT departments nationwide participated in this study. We conducted genetic analysis of 75 ADSNHL patients using the Invader assay, TaqMan genotyping assay and MPS-based genetic screening. RESULTS: A total of 46 (61.3%) ADSNHL patients were found to have at least one candidate gene variant. CONCLUSION: We were able to achieve a high mutation detection rate through the combination of the Invader assay, TaqMan genotyping assay and MPS. MPS could be used to successfully identify mutations in rare deafness genes. Public Library of Science 2016-12-02 /pmc/articles/PMC5135052/ /pubmed/27911912 http://dx.doi.org/10.1371/journal.pone.0166781 Text en © 2016 Iwasa et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Iwasa, Yoh-ichiro
Nishio, Shin-ya
Usami, Shin-ichi
Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients
title Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients
title_full Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients
title_fullStr Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients
title_full_unstemmed Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients
title_short Comprehensive Genetic Analysis of Japanese Autosomal Dominant Sensorineural Hearing Loss Patients
title_sort comprehensive genetic analysis of japanese autosomal dominant sensorineural hearing loss patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5135052/
https://www.ncbi.nlm.nih.gov/pubmed/27911912
http://dx.doi.org/10.1371/journal.pone.0166781
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